Detailed information of acyt_s0041.g131.t2 in Acropora cytherea

Genomic Location: sc0000041_pilon:1900716...1942506
NR annotation: XP_029211747.2, voltage-dependent R-type calcium channel subunit alpha-1E-like isoform X4 [Acropora millepora]
Species Acropora cytherea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
C9D7C2Voltage-dependent calcium channel type A subunit alpha-1 OS=Apis mellifera OX=7460 GN=CAC PE=2 SV=1
P91645Voltage-dependent calcium channel type A subunit alpha-1 OS=Drosophila melanogaster OX=7227 GN=cac PE=1 SV=3
Q99244Voltage-dependent L-type calcium channel subunit alpha-1D OS=Mesocricetus auratus OX=10036 GN=CACNA1D PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000399 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00520
all species →		Ion_transIon transport proteinFamilyInterproscan
PF16905
all species →		GPHHVoltage-dependent L-type calcium channel, IQ-associatedFamilyInterproscan
PF08763
all species →		Ca_chan_IQVoltage gated calcium channel IQ domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005821
all species →		DomainIon transport domainInterproscan
IPR050599
all species →		FamilyVoltage-dependent calcium channel alpha-1 subunitInterproscan
IPR002048
all species →		DomainEF-hand domainInterproscan
IPR027359
all species →		Homologous_superfamilyVoltage-dependent channel domain superfamilyInterproscan
IPR002077
all species →		FamilyVoltage-dependent calcium channel, alpha-1 subunitInterproscan
IPR031649
all species →		DomainVoltage-dependent L-type calcium channel, IQ-associated domainInterproscan
IPR014873
all species →		DomainVoltage-dependent calcium channel, alpha-1 subunit, IQ domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45628
all species →		VOLTAGE-DEPENDENT CALCIUM CHANNEL TYPE A SUBUNIT ALPHA-1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005216
all species →		Molecular Functionmonoatomic ion channel activityInterproscan
GO:0006811
all species →		Biological Processmonoatomic ion transportInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0055085
all species →		Biological Processtransmembrane transportInterproscan
GO:0005891
all species →		Cellular Componentvoltage-gated calcium channel complexInterproscan
GO:0008331
all species →		Molecular Functionhigh voltage-gated calcium channel activityInterproscan
GO:0098703
all species →		Biological Processcalcium ion import across plasma membraneInterproscan
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan
GO:0005245
all species →		Molecular Functionvoltage-gated calcium channel activityInterproscan
GO:0070588
all species →		Biological Processcalcium ion transmembrane transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for acyt_s0041.g131.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP