Gene detail

Detailed information of acyt_s0046.g52.t1 in Acropora cytherea

Genomic Location: sc0000046_pilon:835033...842719
NR annotation: XP_029193167.2, LOW QUALITY PROTEIN: homeobox protein orthopedia-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
Q6SR69	Homeobox protein orthopedia OS=Heliocidaris erythrogramma OX=7634 GN=Otp PE=2 SV=1
Q6SR68	Homeobox protein orthopedia OS=Heliocidaris tuberculata OX=7635 GN=Otp PE=2 SV=1
Q6SZ65	Homeobox protein orthopedia OS=Lytechinus variegatus OX=7654 GN=Otp PE=2 SV=1

Gene family	Subfamily
Transcription Factors Family	Homeobox

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03826	OAR	OAR motif	Motif	Interproscan
PF00046	Homeodomain	Homeodomain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000047	Conserved_site	Helix-turn-helix motif	Interproscan
IPR003654	Domain	OAR domain	Interproscan
IPR017970	Conserved_site	Homeobox, conserved site	Interproscan
IPR051895	Family	Orthopedia Homeobox	Interproscan
IPR001356	Domain	Homeobox domain	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46770	HOMEOBOX PROTEIN ORTHOPEDIA	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0030182	Biological Process	neuron differentiation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K24901	OTP; homeobox protein orthopedia	-	Transcription factors	ko03000	deepkoala