Gene detail

Detailed information of acyt_s0046.g63.t2 in Acropora cytherea

Genomic Location: sc0000046_pilon:1048863...1081331
NR annotation: XP_029205703.1, insulin gene enhancer protein ISL-1-like isoform X3 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

acyt_s0046.g63.t2

CTGGAAAGCGAAGGCCATGCATATTGCCAGCTTGCTTATTAAACGGCAGTGAAAAGTCTTGTTTCTCTTCTATCTGTGGACCATGTCTCGTCTGTTTCTCCTTTAGGGTGAATATTCAAACGAGAAACTCTTCCGCAAGAAAGAAAGTGCAAACTTTTGTAAAGCCAGCTCAACGGGATCCCATTACTAACCGCATCAAGGCCTCAGCAGTAGAAGCTTACACCGTATAACTTTGAAGAGTTTCATGAAGGGTCTCGAGACGAAAATGGAAGCCGTTACGTCCAAAGAAAAGCGTCGAATATCCATGTGTGTCGGCTGCGGCTCCCAGATCCAAGACCAGTACATTCTTCGCGTTGCTCCAGACCTTGAATGGCACGCGGGCTGCCTCAAATGTGCCGATTGCCACACATATCTGGACGAGACTTGTACGTGTTTTGTGCGAGACGGAAAGACCTATTGCAAGCGTGATTACGTTAGGTTATTTGGAACAAAATGCGCCAAGTGCTCTAGATCGGTAACCAAGAATGATTTCGTGATGAGAGCGAAGAATCAAATCTATCACATTGAATGTTTTCGCTGCTTGGCCTGCAGCAGACAACTTGTTCCCGGAGACGAATACGTCCTTCGTGAACCCGATGGATTGTTTTGTAAAGAAGACAATGAAATCGTAGAGAGAGCCGCTCAAACCGCTCACGCCAGAGCAAGCCAACGCTCTTCATCTCAATCATCAACTCACTCCAGCGTCCCGGCCGAAGAATCACCGACACGGCGCGGCAAATCGTCAGAGAAAACGACTAGGGTACGGACAGTTCTTAACGAGAAACAGTTACACACACTGCGAACGTGCTACGCCGCGAATCCGCGACCAGACGCGATGATGAAGGAGCAACTCGTCGAAATGACAGGGTTGAGTCCTCGAGTAATACGCGTGTGGTTTCAAAATAAGCGCTGCAAGGACAAAAAGAAATCCATGATGTTGAACAAAACGTCTTCGCATCATCAACACCAAGGGCCCGGCTCGGACGACGGACAGAGTCCAACAGGGAGCTCACCGAACGCTCTTCCAAACCGCTCGCTACCGCCGTCAGCTATTTCGGGTGTTCAAGTTTTTGCTCCAAGTCTTACGCCGCCCGGTCTCAGACCGCCGCCACCTGACGTTCCAATGGGAGACCTGACCGGCTATCAACCTTGGAAAGCCCTGAACGAATTCGCCATGCATAGTGATATGGATCAAGGCCCTTTCCAGCAATTGGTACAGTTTTCGGAGCAGGCCCCGCATATGGTGTCACGAACGCATGAAGGGATAGGAGCGAATTGAGCCTATGACAGACCGAATCACCTCCTACTACACTGAAGCAAAGATCGTCGATAGCTAACCGGAAAGGGTGGACATGATACCGTAGAGCAAAATTCCAAGCCTGAAATCTTAATTTATTTTATCGACTGCGAGCGAACATTCTGTAAAGTGTATAGTTTAATTATTGTGAAGGGCAGGCTGTTGTTTCGTTCTTCGCATCCATATTGTATATATTTTATGGAATAAGTTTTAAGTGTTGAGAGAGCCTCTAAGTAAAGGGAGATAACAAAAACTATTTAAATGTTTGTTTTAGCCTTCCCTCTGCACCACCTGTGACCAGAAGAGGCTGATATGGCCTCAGTTTTATTATTTGCTTTTCATTTCGAATCATTGAGACGTGGTATGACGAATTTCACGATTGGATCCAAGTCTTCGTGAACTGAATTTTTGGCAAAGATTGTTGATCAGGTATCAGCTATTTATGCGTAACAGATAAGATCTAGCAAATAGTGTATGATTATTTAAATGTTTAGAAAACATACGCAGGCAGGTTTTTGGTGTTGGTGGACTACTCCATTGAAAACTTCTTTATGTAACGTTACAATACACAGACTTAGGCGACACTAACCCATGCAACCATTCTTCGCGAGGTGCAACGGCCATGGGGAGGTTCGCCGAACGTCCTTAATTTTAGAAGATCATTTTCCTGCTCTCTTTGAAAGAAAGGTGCTTTTTCTCGGACACAGCGGAGCCGACAGAACTGAAAATATCAGGTGTTATTTTGCCAAAGCGGTGACATTTTCAACCTCGCCTTAATTTTGCGTCCTGTTTCTCAATGCCAGTGGCTGTCTGCTTTTCCTTCCTTCCTTGTTTTGAGATCTCGCCACTAATCTGATAAATAGTCCACAGAAATGCGAAGGAGAATGATGAATAGGGGTAAAGTAATCGTTCCAAATCGACATCGTTCAACGCTTTCAATGGAAGAGGCGGGGTGATCGTTTTAAAAGTTGATGTTTATCGCGAATGCTTGGGGCTGCGGAATATGTCTGCCTTGGAAAACTCGAAGCCGTGTTCGTTATCCTCGAGGATGCTATGTTGACACTTTATTGGCGATGCAGGTGCTTCAATTTTCGTGTGATTTGCCTCGTTAGCCCGAGGCAGTTGTAGGTGGAAAAGAATGGAATTTTTGATAAGTTTTCTGGTTTTGACAGCTATCGTAATTGTAACTAAACAACGATAGAAACG

Protein

Uniprot

Gene family

Uniprot term	Description
P50211	Insulin gene enhancer protein ISL-1 OS=Gallus gallus OX=9031 GN=ISL1 PE=1 SV=1
P61371	Insulin gene enhancer protein ISL-1 OS=Homo sapiens OX=9606 GN=ISL1 PE=1 SV=1
P61373	Insulin gene enhancer protein ISL-1 OS=Mesocricetus auratus OX=10036 GN=ISL1 PE=2 SV=1

Gene family	Subfamily
Transcription Factors Family	Homeobox

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00412	LIM	LIM domain	Domain	Interproscan
PF00046	Homeodomain	Homeodomain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001781	Domain	Zinc finger, LIM-type	Interproscan
IPR001356	Domain	Homeobox domain	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR047169	Family	Insulin gene enhancer protein ISL-1/2-like	Interproscan
IPR047244	Domain	Insulin gene enhancer protein ISL-1/2-like, LIM domain1	Interproscan
IPR017970	Conserved_site	Homeobox, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24204	INSULIN GENE ENHANCER PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0007409	Biological Process	axonogenesis	Interproscan
GO:0045944	Biological Process	positive regulation of transcription by RNA polymerase II	Interproscan
GO:0048665	Biological Process	neuron fate specification	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09370	ISL1; insulin gene enhancer protein ISL-1	-	Transcription factors	ko03000	deepkoala