Detailed information of acyt_s0054.g88.t1 in Acropora cytherea

Genomic Location: sc0000054_pilon:1205037...1258936
NR annotation: XP_044179715.1, integrin alpha-8-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q92609TBC1 domain family member 5 OS=Homo sapiens OX=9606 GN=TBC1D5 PE=1 SV=1
Q80XQ2TBC1 domain family member 5 OS=Mus musculus OX=10090 GN=Tbc1d5 PE=1 SV=2
Q13797Integrin alpha-9 OS=Homo sapiens OX=9606 GN=ITGA9 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20805Integrin_A_Ig_2Integrin alpha Ig-like domain 2DomainInterproscan
PF01839FG-GAPFG-GAP repeatRepeatInterproscan
PF20806Integrin_A_Ig_3Integrin alpha Ig-like domain 3DomainInterproscan
PF00566RabGAP-TBCRab-GTPase-TBC domainFamilyInterproscan
PF08441Integrin_A_Ig_1Integrin alpha Ig-like domain 1DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR032695Homologous_superfamilyIntegrin domain superfamilyInterproscan
IPR035969Homologous_superfamilyRab-GAP-TBC domain superfamilyInterproscan
IPR048285DomainIntegrin alpha, second immunoglobulin-like domainInterproscan
IPR013519RepeatIntegrin alpha beta-propellorInterproscan
IPR013517RepeatFG-GAP repeatInterproscan
IPR028994Homologous_superfamilyIntegrin alpha, N-terminalInterproscan
IPR048286DomainIntegrin alpha, third immunoglobulin-like domainInterproscan
IPR000413FamilyIntegrin alpha chainInterproscan
IPR000195DomainRab-GAP-TBC domainInterproscan
IPR018184Conserved_siteIntegrin alpha chain, C-terminal cytoplasmic region, conserved siteInterproscan
IPR013649DomainIntegrin alpha, first immunoglubulin-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23220INTEGRIN ALPHAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007155Biological Processcell adhesionInterproscan
GO:0008305Cellular Componentintegrin complexInterproscan
GO:0005178Molecular Functionintegrin bindingInterproscan
GO:0007160Biological Processcell-matrix adhesionInterproscan
GO:0007229Biological Processintegrin-mediated signaling pathwayInterproscan
GO:0009897Cellular Componentexternal side of plasma membraneInterproscan
GO:0033627Biological Processcell adhesion mediated by integrinInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan

TOP