Gene detail

Detailed information of acyt_s0062.g6.t1 in Acropora cytherea

Genomic Location: sc0000062_pilon:81578...111525
NR annotation: XP_029213085.2, beta-1,4-galactosyltransferase 1-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

acyt_s0062.g6.t1

CGCCATTCAGGTGAAAGGAGATGTCTTGCGAACTCGGAGTCGCTCGAGTAGCCACACTTGATCTTAGAAGACACCCACGACGAGTACACAATATTATCTAGGTTAATCCGTCGGTGTCCTCTTTGCCAAATCCTATCACACTCCTTTTTAGAAGAGTAAATTCGCTTTCGTCCACTTCCAGGACGATGGCCGTCACGATCAGACATGATAACACATCAACAGGCTTCACAAACAGCCGCCGGCGAGAGTTATGTTGCAAATAAGTCAGCAAATATACAGTATAGATGTTGCTTCGAGTAAAATTTTCGCTTCGTGCAGATTCTTCCTGCCTATCAGATCAAGCAAACAGGGGAAGAACTAGTTAAAACTGGCTGATGAATAGTACGTTGAGAACATTCCTTTTCTGCACCTTCTCCGTGGCCATAGTTTCGTTGGTCGTCATGATGTACTACTCCGTGGAGTTTTCAAAATATACTCAAATGGGAATGAATTATGTGACCTTGTTAAAAAATCAGTCTCTTTCTTCAACTGATTGGACTGGCGTTACTCGTATAATGAAAATGAAGAACGAGATACGGACAGCCTGGAACACTTCACAAGTTGTGTATTTCCCAACGAGCGCTCTTTCAATTGAACTCGGTCTTCAAGGAAATGTTTCCCCAAAGCAACCAACCAAAAGCGCGAAAAACCTTCAAGAAGCATTCTCTACGGTTCCTACAAGTGCGACCACGAAGAATTTAAGCTTATGTGCGAGTGGCTCAAAACAAGTTGGGCCATTGTATGTAGACAAGACAGTTCCTAAAATGGAAGATGTTGAAAAACAGTTTTCCAATTCCTTTGGTGGTACTATCTTTAAAGGCGGATATTGGAAACCAGGGAATTGTCAAGCAAGGGTGAAGATGGCCCTGATTATTCCGTTTCGTGATCGTTATGAACAGCTGTCAATTTTTGTGCATCACATCCATCCTATTTTAAACAGACAGAATTTGGAATATAGGATATTTGTCATTGAGGAGGCAGGAGATACCAGATTTAACCGTGCTATGCTATTTAACATTGGCTTCAAAGAGGCATTGAAGTTTGATCACTTTGAGTGTTTCATATTCCATGATGTTGACTTGATACCTGAAAATGATCGCAATGAGTATAGTTGTCCTTCATCACCAAGACACATGTCAGTTGCTGTGGATAAATTCAACTATATTTTGCCCTACACAAACATCTTTGGAGGGGTTGGTGCCTTTACCAGGCAACACTTTGAACTTGTCAATGGATTTTCAAACAAGTTTTGGGGCTGGGGCGGTGAAGATGATGACCTTTTCAAAAGAATAAGTGCAAAGGGCCTCAAGCTCACTAGGCCCTCAATGCAATTGGGGAGATACACAATGATTCGATTGTTTCACAAGTCTGCTCAGCCTGATGAACAGCGTTTCGAAAAACTGCGCGGCTCTTCTCAACGGATGAATCATGATGGACTTAACTCGCTCAAATATACAGTGGAGAGTATCACGGAACATCTTCTCTATACGTTAGTTACAGTTAATTTAGAAGAAGCTTTCAAAACTAATTTGAGGTAGCAGCAATTGTCAAGTTATACAATAATGTTTAATTTTTGTAACTTAAGCTGTCTAAATGAAGAGAAAAAGAACAAAAACAAGTCATCAATAGGAACGAAGGGTACAGTTTCTTTCATGCTGGCTCAATGTTCATCATCCAGTGATGTTCCATATTTTTATCATTGGGCAAACAATTTGTGTCAAGCCCCGTTTATCTTCACACTGACATCCGATAGTAGTTAGCGTCACATGGTGGTTGATTGCACTTGTCTGCGTTTCATCGGTTGGGACTGTCATATATATGGAAATATATATATGGAAAATATTTTTGCCGTTCACTTTTATGGGCCCTGAAACTAGAATAGGAATGtaactatgtatttattttggttgaaaatgatcatctggatgattggagtcctaggaaggactgctgcttcgacaatctgtgcggaagccatcttcagattcaGGACTCGCGTTTATTGCAGATACACTATTGAGGTTTATGTAAGAGGAAATTTGGCAAAAGGACTCTTATAATACGACATTGTAAATAAACGCCAAAGAGGAAAGAGCGCGGTGATTAAGAACGCTTCTTTGTAACTTCCACCTTAAGACCATGCAAGATACAAAAGTTGCCAAACTTTGCCACAATAAAGGAGTACGTAAGCC

Protein

Uniprot

Uniprot term	Description
P15535	Beta-1,4-galactosyltransferase 1 OS=Mus musculus OX=10090 GN=B4galt1 PE=1 SV=1
P15291	Beta-1,4-galactosyltransferase 1 OS=Homo sapiens OX=9606 GN=B4GALT1 PE=1 SV=5
P08037	Beta-1,4-galactosyltransferase 1 OS=Bos taurus OX=9913 GN=B4GALT1 PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13733	Glyco_transf_7N	N-terminal region of glycosyl transferase group 7	Domain	Interproscan
PF02709	Glyco_transf_7C	N-terminal domain of galactosyltransferase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003859	Family	Beta-1,4-galactosyltransferase	Interproscan
IPR027995	Domain	Galactosyltransferase, N-terminal	Interproscan
IPR027791	Domain	Galactosyltransferase, C-terminal	Interproscan
IPR029044	Homologous_superfamily	Nucleotide-diphospho-sugar transferases	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19300	BETA-1,4-GALACTOSYLTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005794	Cellular Component	Golgi apparatus	Interproscan
GO:0005975	Biological Process	carbohydrate metabolic process	Interproscan
GO:0008378	Molecular Function	galactosyltransferase activity	Interproscan
GO:0016757	Molecular Function	glycosyltransferase activity	Interproscan
GO:0070085	Biological Process	glycosylation	Interproscan