Gene detail

Detailed information of acyt_s0063.g93.t1 in Acropora cytherea

Genomic Location: sc0000063_pilon:1429144...1435438
NR annotation: XP_015748857.1, PREDICTED: E3 ubiquitin-protein ligase TRAF7-like [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|Beta-prp
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|DWD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019775	Conserved_site	WD40 repeat, conserved site	Interproscan
IPR001680	Repeat	WD40 repeat	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR039241	Family	Ribosomal RNA-processing protein Rrp9-like	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19865	U3 SMALL NUCLEOLAR RNA INTERACTING PROTEIN 2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0030515	Molecular Function	snoRNA binding	Interproscan
GO:0032040	Cellular Component	small-subunit processome	Interproscan
GO:0034511	Molecular Function	U3 snoRNA binding	Interproscan