Gene detail

Detailed information of acyt_s0064.g54.t1 in Acropora cytherea

Genomic Location: sc0000064_pilon:1233469...1245024
NR annotation: XP_029207277.2, uncharacterized protein LOC114970943 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

acyt_s0064.g54.t1

CTATCAAAATTAGCAATGCCATGACTAATGACAGCAATGGATTTCCTTTCTGCCTGTGCTGTTTTTCTCGTTATTACTCATAGGAGCAACAAGTTTCCAAGAACCTGTTTTCACCCAAATTGCATTATGGATCGTAGCTTGGAGCACGTTTTCATGTTGACAAAGTGCTTTATGATTCTCATTGGACTAACCGTTGGTGATCAGTGTAAACAATCCGACGTTTcaacccctggaaaagctttaaggaatcacattttcaagtccgttacagtcacaggcccttttgaatgccacgaactttgtgaaagcgatcttcactgccatagttacaatttcttgattttcggaaagatttgcgagctgaacaacagcacaaaggaagccagatcacgagattacgtaacggatgaagccaggttttacatgCGGATATGGCCACCAATAGGACAATCGTTTGCCTCGTGCAAGGAAATCCTCAACGATCCAAGAGCTAAGGAAAACCGAGATTATCTACTGCAAATGGCCTCTGTAAATATTCCTGTGTACTGTCACATGACAAGTCATGGTCTTGGACCTTGTGAGGGTCGAGGATGGACGCTGATCATGAAAATTGATGGCACAAAGGCAACTTTCAGTTTCAGCTCGAAGCTCTGGAGCAATTATGACACCTTGaacattctaggaggaagaactggatttgactcgcaagagaccaaattaccgacatattggaacacaccgttcaccaagatatgcctcgctatgaagatcggccatcaaattaacttcattaccatcaataggaaggctgactctctgcattcactgatcgctgatgggaaataccgggctacgacgctgggtcgaggtaaatggaagtcattgattggggcggaaggttctttgcaactcaattgtaacaaggaaggcttcaacccttcttgcactggtgataacgccaaagcaagaattggtattgttggaaacaacgaaaatgtctgcagtacttgtgattcttttgtcggatttggtggcgggggatatcctttctataattctattacgtgtgGACGCATGAGAGATCCTTTTGAGTCTTGGCTTTTTCTGTGTGAGAAAGAAGTGTGTTTTCAGGCAAAGGTTGATCGATCAAAGTTCGAGCACGTGCTATTGATCAAAATGGCGGCAACTGGACTCTTTGGTCGTGTCGGTGAGTTCAGACCTGAACGAGAGACTTTTCTTTCATACGTGGAAAGAATGGATATGTTTTTCATGGCAAACAATATCGTGGAAGAACAAGGCGAGGGTAATGAAGAAGCCAATCTTGCAGTACAAAAAAGGAAACGTGCTATTTTCCAGATTGAGATTGTACCAAAAGTCATATTCTACCCTTGAGCAATCTGTTGGCGCCGGCGAAACCAAGAGACACCACGTTTGCTGTTATCATGGAAGCACTGGAGAAACATTATAATCCAGCGCCATTGGAGATAGCAGAGAGTTTTCATTTTGGAACTCGGTATCAGAAACGAGACGAATCAATCGGCGATTTCATTGTGGCATTAAAGAAGCTATCTATTCATTGTAACTATGGCGGGTTTCTCAACCGAGATATGAGGGACCTGCAAGCTGTCGAATACCGAGGGTCTTACCTTTGAGAAAGCGTGCCAGAGAGCAAAGTCGATGGCAATGGCAGAGAAAAACACCCAAGAATTTCGTCCCATCAGTTCAAGTGATGACAGCCAAGACAGCCAAGACAGCCAAGGCGTAGTAAATAAACTGAAAACTGTGAACACTAATGCATCTTTGTGTTACCGGTGTGGTGGTAAGCATGCTGCACCAAAGTGTAGATTTAAGTCAGCCAAGTGCTATAAATGTAGTAAGGTAGGTCACCTTGCATCGGTTTGTCGCAGTAAAGTTGTTGAGTCTAGTGTAAAATCCAAACAACAGGAAAGTGAAGGTAATGTTCATAATGTTTTGGAATCAAGCGAAGCATGTTGTAATGATGATGAGTTAGGTATTTATTCATGGCAGTTAGTACAGATAACCCTACCAACAAAAGTTACACCGTGGAAGTGTCGATAAATGGTTCACTAGTGGCAATGGAAGTAGATACCGCTGCTGACTACTCAATAATGAGTAAGAGTACATATACTCAGAAATTCAGTAATTTCCCACTTTATCCATCAAATGTTGAATTGAAAACCTATACTGGTGAAACCCTTACAGTCTGTGGTGAAATGCAGTCCAATGTTTTGTACGAGGGCCATGAGTATACACTGCCGATTATTGTAGCTAATTACGACAATAAGCCTAGTACGTTGTT

Protein

Uniprot

Uniprot term	Description
B8VIU6	Uncharacterized skeletal organic matrix protein 5 OS=Acropora millepora OX=45264 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00024	PAN_1	PAN domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003609	Domain	PAN/Apple domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16146	INTELECTIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005615	Cellular Component	extracellular space	Interproscan
GO:0070492	Molecular Function	oligosaccharide binding	Interproscan