Gene detail

Detailed information of acyt_s0077.g11.t1 in Acropora cytherea

Genomic Location: sc0000077_pilon:96698...112185
NR annotation: XP_044183923.1, eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like isoform X2 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

acyt_s0077.g11.t1

GTGGGTCACGTTCTCAACTGTGAAGAAATATAATTTTAAGTCCGGAATATCAAACGATTTTTGTGTAACCACGATAAAAAAAATGGACCAAGTTAATTCGGACGCCAGTGCACCAGATTCGTGGGACTCTTTGGATGATCCGGGTCCAGTTGAGATCAGCGGAGAGGCGAAGAATGTGGATGAACAACTACAATCCCTCAATATTAACGCAAAACCTTTCGTTCCCAACGTAAATGCGCCGGCTTTTGTTCCTTCCTTTATGAGAAATCAGGCGACTGAAGCTGTCCCATCAACTAATGGTGAAACAGAGGCAAGAATTTCAGATTCAGATGAACAGCAGGCAGTGGCTGAAGATGAGGAACTTGTTAATGATGTTGAAATGAAAGACGAAGAAGAAGCCAAACCTATCCAAACAACAAGTACCAAGAAAAAAAAAGAGGAATCCATTGAGGACAAGAGGGAGCACATCAATATAATATTTATTGGTCATGTTGATGCTGGGAAATCAACAATTGGAGGTCACGTCATGTATTTGACAGGCCAGGTGGACAAAAGAACGCTTGAAAAATATGAAAGAGAAGCAAAAGAGAAAAACAGAGAAACATGGTACTTGTCTTGGGCATTAGACACCAACCAAGAAGAAAGAGATAAGGGAAAAACAGTCGAAGTTGGCAGAGCGGCATTCGACACACCAACTAAACATTTCACATTACTGGATGCCCCAGGGCATAAAAGCTTTGTCCCGAACATGATCAGCGGTGCTTGTCAGGCAGATTTGGGGGTGTTGGTAATATCAGCCAGGAAAGGTGAATTTGAAACTGGGTTTGAAAAAGGAGGGCAGACAAGAGAACATGCCATGTTGGCCAAGACAGCGGGAGTCAAGCATCTAGTGATTCTTGTAAACAAAATGGACGACCCCACGGTGGAATGGGACAAAACAAGGTATGATGAGATCCAAACAAAACTAACGCCATTTTTGAGGAAAGTTGGCTTCAACCCTAAAACAGATATCTACTACATGCCTTGCTCAGGATTGACAGGTGCCAATCTTCGTGAGAGATTAGACCCTGGAGTTTGCACGTGGTATAGTGGGAAGGCTTTCTTGGAATATATAGACGAACTTCCATCGCTCACGCGGGCCATCAATGGGCCTCTCAGAATTCCTTTATCAGAGAGATACAAGGATATGGGAACCATTGTGCTGGGAAAAGTGGAGTCTGGCAAACTGGATAAAGGAGAGGCGCTAATGCTGATGCCAAACAAGGTTCCAGTCGAGGTGCTAGGAATCACGTTTGACGAAGAAGAGAGATCGGCCGCATTAGCTGGAGACAATGTCAAGCTCAAACTGAGAGGAATCGAAGAAGAGGACATCTCTCCAGGTTTTGTACTCTGTTCACCTGAAAACTTATGCCACACTGTTAGATCATTTGAAGCTCAGGTGGTCATCCTTGAACATAAATCCATTATCTGCGCTGGTTATAGCGCTGTTCTTCATATTCACAATGTAGTCGAAGAAGTCACATTTGTGAAATTATTGGACTTAATAGACAAAAAAACGGGGAAGAGAATGAAGCAAAGACCGCGATTTATCAAACAGGACCATGTGGCAATTGCTGAATTACAGACCACTGGTGTTATTTGTATAGAGAAATTTTCCGACTTTCCACAAATGGGAAGATTTACACTTCGAGATGAAGGCAAAACCATTGGCATAGGCAAAGTTTTAAAGCTTATGAACTAATACCTATTCCACGAACTGTTTCAAAACCAACTGCTTCATTTGAAGGAATTTATCAAATCATCTAGCACCCACAAGAATCTTTGTGGTCGAGAGTCTTATAAACAAGTCACGGAGATTCGGATATTGGGAAATATAATATTGACCATCGAAGAGGCATTGACAATGTGGTTATTTTTCTGCAAAGTTACGACGATGTCGAGTGATATGGACAAGCAAACATCCTTGTAACGTTCGTTCAAGTTGAGTTGTAAAAACTCCACTGCAAAAGTCAGCCAATAATGTTTTACAGCAACGCCATGGAAAAGTGTGAAAGGGTTGGCTTTGCGCCTGTGGAGAAGAGTCGTTTTCGTTTTTTCACGAAGGAGCTGATGAGAGGAGATAATCTCATTGCGCATACTGTGTAGCGCCGAAAAATGTTGTCCAAGCTGATTTTCGGCGCTCAACTCGCCACGCGCGTTTACTTAATCTTTCTCGCGCGCGTGCAACTTATCCATCCGCAAAATTGCTATGATCGAGAGAGTCTTGGACCAAGTTCAAGATGAGTTCCTTTTTCCATCTTCATACTGATGTGTTCCTTTGCTGGTGCCCAACCTTTGGTGGCTACCTGGGGCAGGGAATTTTGGACAAGAAAATAGATGAAACTGAAAAAAAAAAACAAACATGGTTGCAAATGTTCATCCAAACTTACCCGAAAATGTTGTTAAAAGCTTGTTTTCCATACAACAATAAGCCGACGAACTCTCTCTTACTTGGAAGCAAAGGGTTGATTCCTGGATGAGTAAATTCTGCGAAACAGCCGAGAATTGGAAAACCGACTGTTTTGCAGTCTTAGCTGGAAAATGTTTTATTGCGAATGTATATTGTTGTTCGATACTCAAAACAACTGCCACTATGTGAGAGTCAAAGCTCATGGCACCTGCAACATTCCAGTACGTCGTATAATCATAATACGAAGTCATACCTTGGGTGTATATGTTGAACGCGTTTTATTTTTCTTGCAAATAAAAAATGCCTGTTGAC

Protein

Uniprot

Uniprot term	Description
P15170	Eukaryotic peptide chain release factor GTP-binding subunit ERF3A OS=Homo sapiens OX=9606 GN=GSPT1 PE=1 SV=1
Q149F3	Eukaryotic peptide chain release factor GTP-binding subunit ERF3B OS=Mus musculus OX=10090 GN=Gspt2 PE=1 SV=1
Q8IYD1	Eukaryotic peptide chain release factor GTP-binding subunit ERF3B OS=Homo sapiens OX=9606 GN=GSPT2 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00009	GTP_EFTU	Elongation factor Tu GTP binding domain	Domain	Interproscan
PF03144	GTP_EFTU_D2	Elongation factor Tu domain 2	Domain	Interproscan
PF03143	GTP_EFTU_D3	Elongation factor Tu C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000795	Domain	Translational (tr)-type GTP-binding domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR031157	Conserved_site	Tr-type G domain, conserved site	Interproscan
IPR009001	Homologous_superfamily	Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal	Interproscan
IPR050100	Family	Translation factor GTPase superfamily members	Interproscan
IPR004161	Domain	Translation elongation factor EFTu-like, domain 2	Interproscan
IPR009000	Homologous_superfamily	Translation protein, beta-barrel domain superfamily	Interproscan
IPR004160	Domain	Translation elongation factor EFTu/EF1A, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23115	TRANSLATION FACTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003924	Molecular Function	GTPase activity	Interproscan
GO:0005525	Molecular Function	GTP binding	Interproscan
GO:0003747	Molecular Function	translation release factor activity	Interproscan
GO:0006412	Biological Process	translation	Interproscan
GO:0018444	Cellular Component	translation release factor complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K03267	ERF3, GSPT; peptide chain release factor subunit 3	-	Translation factors	ko03012	deepkoala