Gene detail

Detailed information of acyt_s0077.g63.t1 in Acropora cytherea

Genomic Location: sc0000077_pilon:908196...921744
NR annotation: XP_029199792.2, LOW QUALITY PROTEIN: soluble guanylate cyclase 88E-like [Acropora millepora]
Species Acropora cytherea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

acyt_s0077.g63.t1

ATGTATGGACTTCTTCTTGAGAATTTCCGCCTTGTTATGTTGGAAAAATATGGCGAGCCTATCTGGAATAACATTGTGGAAACGGCTGGATTGCAGAGTTACACATTTGCTTCGCATAAGGTGTATTCAGACGATATCATGGGGAGGCTCGTGCAAGCCGCTTTTCAAGTAACGAAACAAAGCACTGAAGAGATGACAGAAGAAGTTGGTTTACATTTTCTGGGATTTATTGGACAATATGGTTATGACAGAATTTTGAAAGTATTGGGGAGACACATGAGGGATTTTTTAAATGGCCTGGATAATTTACATGAGTATTTGCGCTTCACTTACCCTAAACTTAAAGCGCCTTCTTTTTTTTGCGAAGATGAAACCGAACATGGCCTCAAACTTTATTACCGTTCTTCGAGAAAGGGCTTTCTCTATTATGTAATTGGTCAGATCAAAGCGGTCGGTCGATTTTTCTATCACATAGACGTTCAAGTGGAAGTTTTGGAATATACGGAAAACAAAGAGGGAAGTAAAGCCTTGTTTCAGCTTATCTTTGACAACAGTGTTTACATGGAGACTCGCAGACGGCCGAAGCGCCATTCTGTCATTTCTTTGAGCGATGATGTCGGAAATCTTAAAATACCCATGGATGTATTATATGAAGTGTTCCCATTTCACATTGTGTTCGATCAAGATATGGAGATTTCCAGCACTGGTAATAGTTTAGAAGCTGTGTTACGAGATCTGCCTGGAAAAATAATTTCTTCGAAGTTCAGTTTGATTCGTCCCTTCATGGAATTTACATGGCAAAATGTGTTAATGCACACAAATGTTGTGTTTGAAGTACAATCAACTGAAGCGGTAGAGCTGGCAAATACTGTGGATGCAAGCCTTAAAAATGGAGAGACCTTGGTCAATGACAAGGAATCGGAAAGCACTGGAAATCTTTGTTATATTCACCTCAAGGGGCAAATGCTTTTCATGAAGGAGTGGAATTCCATGGTGTACCTGGCAACACCTATTATTGACACCCTGGATATGTTACACAGTCTCGGGTTGTATATTAATGACTTGAGTATGCATGATTCAAGTAGAGACCTGGTGTTAGCTGGAACCCAACAATCTGCAGAGCTGAGACTTGCTCTTGATCAGGAACTTCTTAAAAGCGCAAAGCTTGAAGAGAGTATGAAGGCGCTGGACATGGAAAAAAGGCGAACAGATTCGCTGCTTTATCAAATGATTCCCAGATCAGTTGCTGATCGATTGCGCCAAGGAGAACCAGCTCTTAACACCTGCGAGATGTTCCATGATGTGTCTGTGTTGTTTAGTGATGTCGTGGGATTCACACACATTTGTTCTCTTATCAGTCCAATGGGAGTTGTCACCATGTTGAACAACATGTACACAGCCTTTGATCAAATCTCGGAACAACACAACGTCTACAAGGTGGAGACAATTGGTGATGCATACATGGTTGTCAGTGGTGTTCCTGAAAGGAGCAAGTACCACGCGGAACATGTAGCTGATCTGGCCCTGGACATGATTTCAGCAATGCCCAGACTGGTGGATCCCTCAAAGTCATCACCTCATCTCAAAATTAGAATAGGTGTACACACTGGGATGGTTGTGGCAGGTGTGGTGGGTTTGAAAATGCCGCGCTATTGCTTATTCGGTGACACAGTCAATACAGCATCAAGGATGGAGTCCACAGGAATGGCAATGAAAATCCACATCAGTGAGACAACCTTCAATTGTTTACAAAATGCAAATTATCGGATGAAGCAGCGGGGGAGCATTGAAATTAAGGGAAAAGGTGGAATGAAGACTTTCTGGCTCATGGGCAAGAAAGCTGCGGTGGGAGAGAAAACTGTGCAGTCGTTCTTATCTTTTGGCGGAGGAAGTAATCCAATGGTGATCAATACGCAGAATGACGATACCATCTCCAACTCAACCCTGGGTCGAATCGATCTGCACCTCTCAGGGCAAGCGATACGCgaagaagaggaagaaggagaacaagaCAATGATGAGTCGTTGAATTCGTGGCCCATTGAGGAGAACGAAATTATAAACCTAGAGAAAGATAGTCCTGTGGCTTACTATGGTCATGTTCCACACACACCTCTGACTACAAAGGATGATTTTAGGTTTCAGTGGCACAAAGATAAGgttgtttcattttgtgacgcgaagcctcgagattcttcttaa

Transcript

acyt_s0077.g63.t1

GTTTAGGAACAAAGAAAAAAAGAAAAAAAGAATGGACTAAACCTGAATAAACGTATTGCACTCCAGGCTATCATTTCAACAGTTCAATGAAACTTGCGAGAGAGGCAACAGTGGCAAATCAATTTGCTTATTATGCGTCCAATATTTTGGGTCATCCGATAATTCATTACTTTGGCTTCCGGACAGTACAGTGAGTGTCTTTTATTCGCTTATTACTTGAGAGTTTGCTCGTTTCATAGTGACCAACAAAAAGCGTCGATGGCTAGACTTCGATAAGTGTGTTAGAATTTCAGCTGTATTTTTCGATGCATGATAAGGTGGAAATATTATATTTCGCTTGGAATCGTTCCGAAAATGGCCTGTCGTTGTGATCATGATTAGACAAATGTCGTCTTGGGATGTGAGCTTCCGTGCGTCCTTTTTTGTCTGCCGACCGTAGCGCGGGGCCTCGAGATAGTTTACTGATTTGATCTCTGGATTAAGTTTATGGCCAACCACGAAAAGTGTTCAATATAATTTTTCGTTTGAAAATCATTATCAACGTGCAATCCATACGTGACCGCTACAAGGTTATAACCTTGTATTGTCTAACATTTGTGTCTCCCTGTTAACGAAATCGAAGAGGACTCCTTCACAATGTATGGACTTCTTCTTGAGAATTTCCGCCTTGTTATGTTGGAAAAATATGGCGAGCCTATCTGGAATAACATTGTGGAAACGGCTGGATTGCAGAGTTACACATTTGCTTCGCATAAGGTGTATTCAGACGATATCATGGGGAGGCTCGTGCAAGCCGCTTTTCAAGTAACGAAACAAAGCACTGAAGAGATGACAGAAGAAGTTGGTTTACATTTTCTGGGATTTATTGGACAATATGGTTATGACAGAATTTTGAAAGTATTGGGGAGACACATGAGGGATTTTTTAAATGGCCTGGATAATTTACATGAGTATTTGCGCTTCACTTACCCTAAACTTAAAGCGCCTTCTTTTTTTTGCGAAGATGAAACCGAACATGGCCTCAAACTTTATTACCGTTCTTCGAGAAAGGGCTTTCTCTATTATGTAATTGGTCAGATCAAAGCGGTCGGTCGATTTTTCTATCACATAGACGTTCAAGTGGAAGTTTTGGAATATACGGAAAACAAAGAGGGAAGTAAAGCCTTGTTTCAGCTTATCTTTGACAACAGTGTTTACATGGAGACTCGCAGACGGCCGAAGCGCCATTCTGTCATTTCTTTGAGCGATGATGTCGGAAATCTTAAAATACCCATGGATGTATTATATGAAGTGTTCCCATTTCACATTGTGTTCGATCAAGATATGGAGATTTCCAGCACTGGTAATAGTTTAGAAGCTGTGTTACGAGATCTGCCTGGAAAAATAATTTCTTCGAAGTTCAGTTTGATTCGTCCCTTCATGGAATTTACATGGCAAAATGTGTTAATGCACACAAATGTTGTGTTTGAAGTACAATCAACTGAAGCGGTAGAGCTGGCAAATACTGTGGATGCAAGCCTTAAAAATGGAGAGACCTTGGTCAATGACAAGGAATCGGAAAGCACTGGAAATCTTTGTTATATTCACCTCAAGGGGCAAATGCTTTTCATGAAGGAGTGGAATTCCATGGTGTACCTGGCAACACCTATTATTGACACCCTGGATATGTTACACAGTCTCGGGTTGTATATTAATGACTTGAGTATGCATGATTCAAGTAGAGACCTGGTGTTAGCTGGAACCCAACAATCTGCAGAGCTGAGACTTGCTCTTGATCAGGAACTTCTTAAAAGCGCAAAGCTTGAAGAGAGTATGAAGGCGCTGGACATGGAAAAAAGGCGAACAGATTCGCTGCTTTATCAAATGATTCCCAGATCAGTTGCTGATCGATTGCGCCAAGGAGAACCAGCTCTTAACACCTGCGAGATGTTCCATGATGTGTCTGTGTTGTTTAGTGATGTCGTGGGATTCACACACATTTGTTCTCTTATCAGTCCAATGGGAGTTGTCACCATGTTGAACAACATGTACACAGCCTTTGATCAAATCTCGGAACAACACAACGTCTACAAGGTGGAGACAATTGGTGATGCATACATGGTTGTCAGTGGTGTTCCTGAAAGGAGCAAGTACCACGCGGAACATGTAGCTGATCTGGCCCTGGACATGATTTCAGCAATGCCCAGACTGGTGGATCCCTCAAAGTCATCACCTCATCTCAAAATTAGAATAGGTGTACACACTGGGATGGTTGTGGCAGGTGTGGTGGGTTTGAAAATGCCGCGCTATTGCTTATTCGGTGACACAGTCAATACAGCATCAAGGATGGAGTCCACAGGAATGGCAATGAAAATCCACATCAGTGAGACAACCTTCAATTGTTTACAAAATGCAAATTATCGGATGAAGCAGCGGGGGAGCATTGAAATTAAGGGAAAAGGTGGAATGAAGACTTTCTGGCTCATGGGCAAGAAAGCTGCGGTGGGAGAGAAAACTGTGCAGTCGTTCTTATCTTTTGGCGGAGGAAGTAATCCAATGGTGATCAATACGCAGAATGACGATACCATCTCCAACTCAACCCTGGGTCGAATCGATCTGCACCTCTCAGGGCAAGCGATACGCgaagaagaggaagaaggagaacaagaCAATGATGAGTCGTTGAATTCGTGGCCCATTGAGGAGAACGAAATTATAAACCTAGAGAAAGATAGTCCTGTGGCTTACTATGGTCATGTTCCACACACACCTCTGACTACAAAGGATGATTTTAGGTTTCAGTGGCACAAAGATAAGgttgtttcattttgtgacgcgaagcctcgagattcttcttaaattttgagcacgaaaagcggcatttaaacagaattcggttattatcgattttctcgtaaataaatcgatattcagccaaacgaagtatgtcgtgatttgtttcacaccaaggcctacctaacctgtgaatatgagcagaatttattttttggctgttgccgccatatttcaaaaatgtttgatttttggacacattcgctcttaaCACGGACAAACTTTTTAGGTATGTTTTTGGAAGTTTTTAAAGCATTATTTTATTCCATTTTGAAAATTTCTTTTTATTGTTGAATGAAAGTGTATAACATAAATGAATGGAGTTTACCACGAGATAAAATAATGAAAAAATAACTGCAGGCCAGTTGATTACATATTACTGTTTTCAATTTCAATGCTTGCCATTATGACTGTCGGGCATAAAATTGAGTGCTATTTGAGGACATTTCTTTTTTTTTCCAACGGAATGTTGTGTTGGTATTTAATGAACCCTTTGAGTCTTGAGAGTGATCAACTTAAAATGGCTCCTTACAATGTAGATACAACAGTCAGAGAAATGATTATAAAATTTTCTCAGATGGCCTCGATGAAAGTACTAATTTTAGCAAACTCTCGTAAGTAGTTTTGTAAGAAAATGTAAGGACATTAGTTAGGAGAGTCTGTCTGTGGATCGTTAAAAGTTA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8INF0	Soluble guanylate cyclase 88E OS=Drosophila melanogaster OX=7227 GN=Gyc88E PE=1 SV=4
Q86C56	Soluble guanylate cyclase gcy-31 OS=Caenorhabditis elegans OX=6239 GN=gcy-31 PE=2 SV=2
P90895	Soluble guanylate cyclase gcy-33 OS=Caenorhabditis elegans OX=6239 GN=gcy-33 PE=2 SV=4

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001367 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07701 all species →	HNOBA	Heme NO binding associated	Domain	Interproscan
PF07700 all species →	HNOB	Haem-NO-binding	Domain	Interproscan
PF00211 all species →	Guanylate_cyc	Adenylate and Guanylate cyclase catalytic domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR038158 all species →	Homologous_superfamily	H-NOX domain superfamily	Interproscan
IPR001054 all species →	Domain	Adenylyl cyclase class-3/4/guanylyl cyclase	Interproscan
IPR024096 all species →	Homologous_superfamily	NO signalling/Golgi transport ligand-binding domain superfamily	Interproscan
IPR042463 all species →	Homologous_superfamily	Haem NO binding associated domain superfamily	Interproscan
IPR029787 all species →	Homologous_superfamily	Nucleotide cyclase	Interproscan
IPR011645 all species →	Domain	Haem NO binding associated	Interproscan
IPR011644 all species →	Domain	Heme NO-binding	Interproscan
IPR018297 all species →	Conserved_site	Adenylyl cyclase class-4/guanylyl cyclase, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45655 all species →	GUANYLATE CYCLASE SOLUBLE SUBUNIT BETA-2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0020037 all species →	Molecular Function	heme binding	Interproscan
GO:0009190 all species →	Biological Process	cyclic nucleotide biosynthetic process	Interproscan
GO:0035556 all species →	Biological Process	intracellular signal transduction	Interproscan
GO:0004383 all species →	Molecular Function	guanylate cyclase activity	Interproscan
GO:0008074 all species →	Cellular Component	guanylate cyclase complex, soluble	Interproscan
GO:0019934 all species →	Biological Process	cGMP-mediated signaling	Interproscan
GO:0038060 all species →	Biological Process	nitric oxide-cGMP-mediated signaling	Interproscan
GO:0070482 all species →	Biological Process	response to oxygen levels	Interproscan
GO:0006182 all species →	Biological Process	cGMP biosynthetic process	Interproscan
GO:0016849 all species →	Molecular Function	phosphorus-oxygen lyase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01769	E4.6.1.2; guanylate cyclase, other	EC:4.6.1.2	Purine metabolism	ko00230	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.