Detailed information of acyt_s0082.g15.t1 in Acropora cytherea

Genomic Location: sc0000082_pilon:272676...286181
NR annotation: XP_015764026.1, PREDICTED: translocon-associated protein subunit alpha-like [Acropora digitifera]
Species abbreviation ACYTH · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P45433Translocon-associated protein subunit alpha OS=Oncorhynchus mykiss OX=8022 GN=ssr1 PE=2 SV=1
A6QLP7Translocon-associated protein subunit alpha OS=Bos taurus OX=9913 GN=SSR1 PE=2 SV=1
P16967Translocon-associated protein subunit alpha OS=Canis lupus familiaris OX=9615 GN=SSR1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005904 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03896
all species →		TRAP_alphaTranslocon-associated protein (TRAP), alpha subunitFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005595
all species →		FamilyTranslocon-associated protein (TRAP), alpha subunitInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12924
all species →		TRANSLOCON-ASSOCIATED PROTEIN, ALPHA SUBUNITInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005789
all species →		Cellular Componentendoplasmic reticulum membraneInterproscan
GO:0005783
all species →		Cellular Componentendoplasmic reticulumInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for acyt_s0082.g15.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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