Gene detail

Detailed information of acyt_s0082.g8.t2 in Acropora cytherea

Genomic Location: sc0000082_pilon:168587...186635
NR annotation: XP_015774881.1, PREDICTED: cyclic GMP-AMP synthase-like, partial [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

acyt_s0082.g8.t2

AGTGACATGTTTCTTTTTCTTGCGCTTATTCCATTAGTGTTATGCTTATCCCACAAGTGTGAACCAGGCTGAATGGGAAGTTTGGAGAGTACTGAAGGAGCTAAGGACTGCGCTGGTGTGATCCTTTACGCAGCCGAGAATGCCACACCGGTTGCGTTAGATGCTATTCAAATTTTAGGTGGAAATGGTTACATCAACGACTACCCTACAGGGAGATTTCTACGAGACGCCAAGTTGTGCGAGACTGCAGCTGGTACAAGCGAAATACGAAGATGAGACAAAATGATGCGACAACTGAAAAACAAGCTATTACGCAAATTATACAAGGAGGCAGAGTTTGACAGGGAACACCAAGAAGTGAAAGAGATAGAGGAAACAGTGAGGCACTTAGTGGAAGAAATTGCAGAAAGCATTGCCGAAAAGGATCCACTGTTCACGAACACCATTCTCCAGAGCGGAAGTTTTTACGAGGATCTCAAAGTCGAAGGGCCTGATGAGTTCGATTTTATGATATGCTTGGAGGAATTGTCCACACCTGGGGTTTGCGCGATTAGAGCGATTCCTTTTCGCTCAGTTCAAGATCCAGGTTACGTTCATGTTGAAATAGAAGACCCTATCTCACGGAAGAGGTGGAAAAGATACACATCAAAGAGGAAAGCAAATTTCTTGAAACCTAAAACACTGCTGGAGAAGTTTAAATCCCTGATCGATGAAGTTCTGGCCGAGAAAAAGGAACATTTATCTGAAAAGCTGGCAAAGAAAGTTGATGTCCAACTCAGGAAGATTCCAGTTACACTGACACTCACTTGGAACGGAACTGAATATAAACACTATGAAATTTCTGTCGACTTAGTCTTGTGTATCAGTGTGAATGGATGGCCGAAAGATTCTAACGTGAAGGATCGTTGTGACAGATTCCATTCCGGGTACGAAATGATCAGGAAAGCTACTCAAGATTCAATTTACACAGAACGATACATGCTCACTCCACAGGAAAATCATGAAGGATATGAGATATCGTCAGACTGTTACCTTTGGCTACAAATTTCAAGAATGAAAGTTTCCTTGTTGTGCATGGCACAGGGGATGATAACGTACATTTTCAGAATACTGCACAACTGGTGGCAGCTCTTACTAAAGCTGGAGTCAAATACCAAGTTCAAttttacccagacaagaatcacGgacttagtggtggtgggacaacagatcatttgTATCATCTGCTGACAAGATTCCTCACTGAGAAACTATCACTGCGTAGTTGACATTGAGGAAGTATTGCACCTTCCTCAATCTTCTTCAAAGCTTCGTTTTTGCTTACTCCAACAGTCTACCTATTTTAATTTACAAGATTTTTGGCAGTTGTGGCCTAATTAACCCATCATAAGGGTTTTTTGAACAGTAGTGATAGTGTGAAATGCTGACAAAATTCATAAATATCATCCTTACATTTCTGAATGCAATATGAAATGTTTTTCTTCATGTTTTCTCTATTTTTATTCTCAGAAGTCAAGTAATTTAATTTCATGTAAATAAGAATAACTGTCATGGTCATTTTGAAGTGACAGACATTGAAATATTGGAACAAAGGTCTTGGAAGAAAAATAATGTAGAGACTAGGTTAGTTGCAATCACTGAAATATCCCATTGACTATAATTTTTATTTTGCAAATGAGTTAACAAGAATCCTCAAAAGTTTGTACTTTAGCTGTTTTTGTGTGAATGTCTCGTCAAGATTTCTGCTGTTGGATGGTAATTATGTTGTTGACATATTGATCCAAATAATAATTGTGTAAGCATTGGTCAAACAATTCAGTTCTTTATGGACCTGTAACTAAAAGAATTGTTAACTTTGCTATTTTAGGTTATCTGAAGCAAATAAGAATTTTAATTTTTTGGGAAATTTTGTGATGGGTTTTTTTAACCAAGAGAAAGGATAATTATAAGACTACTAGATGTATTTAAATGGTTACACTAAGTAATAACTTTCCACTTTAATTTTTGTCATTCATTTAATACACTCATCAACAGCAACATCAAGTATGATTTTCATATACATGTGAAACGTAATAGTAAAAGTGGGATTTTTGACAGCTGATAACATCAGGATACTGTTGTTTgaaatttggaacgagaatctggtaatttatcagaagtcacttaaggcttttctccaggcacccctgcaattgttGGTCAGTGACAAGGTGGCCCTTTCATCTTATTAATATGATCTGTCCTATAGACTTAAGGAAACAAAGATATTTAATTGTCAAACAGTTGTACGTCCTTGTTTTTTCACATTCCAGCCACTGATGATGGTCTTTAAACTATGCACTGGGGATCTCCTTGCCAGGCATACTGTGTAGTTTTTGACCCTTCGCAGTTGAGGCCTTTCATTGCCGTTGAAACTCAACAGGTTGAAAATCTCTTTTATTGTTGAAACAGTAATAGTTCCTTGTGTTTCCAGTGTCAGGCCACTGATAGTGGTCTTCATGTATGAGCAGGGGTTTTTCCTTGCAATGCATACTGTACACTTGTTGACCTCTCCCAGTTGACTTTTGGCCAATGAAACACAACAAGTTCAAACTCCCAAATGACAGCAAGCAAACCTGTTAGCTTTGTACAGGAGTTGAATAAGGGAATAACAGGAACAAATCCATTTAGTAAgttaatcttggtgtatgaacctgtgatcttttttctttgttttgttaggttggactggggtttagttgttgcttaaTtaatgaaccctggctattttgttttacatcattcgtgagtttaacagggtcttacatggagaatga

Protein

Uniprot

Uniprot term	Description
Q9JHI5	Isovaleryl-CoA dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Ivd PE=1 SV=1
Q9FS87	Isovaleryl-CoA dehydrogenase, mitochondrial OS=Solanum tuberosum OX=4113 GN=IVD PE=1 SV=2
Q75IM9	Isovaleryl-CoA dehydrogenase, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0125500 PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00441	Acyl-CoA_dh_1	Acyl-CoA dehydrogenase, C-terminal domain	Domain	Interproscan
PF03281	Mab-21	Mab-21 protein nucleotidyltransferase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036250	Homologous_superfamily	Acyl-CoA dehydrogenase-like, C-terminal	Interproscan
IPR006089	Conserved_site	Acyl-CoA dehydrogenase, conserved site	Interproscan
IPR009075	Domain	Acyl-CoA dehydrogenase/oxidase, C-terminal	Interproscan
IPR046903	Domain	Mab-21-like, nucleotidyltransferase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43884	ACYL-COA DEHYDROGENASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016627	Molecular Function	oxidoreductase activity, acting on the CH-CH group of donors	Interproscan
GO:0003995	Molecular Function	acyl-CoA dehydrogenase activity	Interproscan
GO:0006552	Biological Process	L-leucine catabolic process	Interproscan
GO:0008470	Molecular Function	3-methylbutanoyl-CoA dehydrogenase activity	Interproscan