Detailed information of acyt_s0096.g3.t1 in Acropora cytherea

Genomic Location: sc0000096_pilon:41291...62525
NR annotation: XP_015749342.1, PREDICTED: tigger transposable element-derived protein 4-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q17RP2Tigger transposable element-derived protein 6 OS=Homo sapiens OX=9606 GN=TIGD6 PE=1 SV=2
O75564Jerky protein homolog OS=Homo sapiens OX=9606 GN=JRK PE=1 SV=3
Q9HAV4Exportin-5 OS=Homo sapiens OX=9606 GN=XPO5 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03221HTH_Tnp_Tc5Tc5 transposase DNA-binding domainDomainInterproscan
PF04218CENP-B_NCENP-B N-terminal DNA-binding domainDomainInterproscan
PF08389Xpo1Exportin 1-like proteinRepeatInterproscan
PF03184DDE_1DDE superfamily endonucleaseFamilyInterproscan
PF03810IBN_NImportin-beta N-terminal domainRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006600DomainHTH CenpB-type DNA-binding domainInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR050863FamilyCentromere and Transposable Element-Derived ProteinInterproscan
IPR007889DomainDNA binding HTH domain, Psq-typeInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR013598DomainExportin-1/Importin-beta-likeInterproscan
IPR004875DomainDDE superfamily endonuclease domainInterproscan
IPR001494DomainImportin-beta, N-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19303TRANSPOSONInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0031267Molecular Functionsmall GTPase bindingInterproscan

TOP