Gene detail

Detailed information of acyt_s0096.g52.t1 in Acropora cytherea

Genomic Location: sc0000096_pilon:688311...697421
NR annotation: XP_015765607.1, PREDICTED: allene oxide synthase, chloroplastic-like isoform X1 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

acyt_s0096.g52.t1

ATCAACATATGCCGGCAAAACAAAAGCATTCTATGGCTGTTACTAATAAACAAATACCAAATTGCATGTGCAGCTATTTAATTCGCTTTAATAGTAAGGATCTTGAATACAAGCATAGACCAATAACAACTGCGGTGAGTTAGAAGAATACAACAGAGAAATACCAATGGTAGTCGCTCACGGACAAAGCTCTGAGGTGAATGAATAATATTCTAAGAAACTTATTTCAACTGCGAGCTTTCTGATTTTGTTCTAGACAAAAGACTACAGTAAGCAAAGCAATGCAAGTTTCTCCCATTCACGATGAAGATAAAGAAGTACCAGGACAAGACAAATGGACCTTTTTTCATTTGGCTGAACTTGTCATGAAGGGCCATGGCTACTTTTACAAGAGACGACGCAAATATAAAAGCTCTGTGTTTAAAGTCAACATGGGTGTTAAGGGTATCCATGTCTGCGATAAGAAGGCCATGAAGGTGTTTTTTGACACGAGTAAGATTTATAAAGAGCCAGCCTTTGGAAGGCTGCATTACAATATTTGTCTACTGGATGGTTATACACCTTCAATGTTTTCAAATGGAATCCCTCACCAGAAACAGAAGGCTTTCTTGGTTCAAATTTGTAAAATAGCTCAGAGGAGCAAGATATTTGACACGAGTCTAAAACTCATCAAGGAATATTCTAGGAATTGGGAAAAAGCAGATTCTCAATTGAAGGCAACCTGGGAATTAAGTATCATGGACCTCGTCAGTGACATTTTCACAGAAGCTTTTTTGGGGACAAGATTAGATCAAAAGTACATGTACAATTTCCTGAAAGGAAGCTGGGGAAAAGGGAGAGTATTGAAGAAAGCAATGGAAGCAGCCAGTTGTCTAAAAAAAACGTTACAAGGAACTAAAGGAAGTTCTGATGTCATTGAAATTCTTAAAATGGCGGCGAACGCTGGAATTACGGAGGACCAAGCCCTGATGGACATTTTATTTATGCTCAATTTTAACGCGTATGGTGGTGTGTCTGGTGTATTGCGCACATGCCTTGCACGATTGTATGTCCTTGAAGAGGACTACAAACAGAGAATGAAAAATGACTTAAAGACAATCTTGTCAAACAAAGAACTTTCTGAAGCATCACTGGAGGAAATGATACTCTTGCATAACTTTATTCTCGAAGTACTGCGCATGCATCCACCTGTTCCAGTATTTTTCGGCAGAGCAAGAGACGACTTCTCTCTCGAAACAGAATGCGGTACATTTATCGTTCGAAAGGACCAGCTCCTCGTGGGAAACGTGCATATGGCTCATCGAGACAGCTCTATCTTTGATCAGCCTGACAAATTTATGCCGTCTCGCTTTGAAGACGAGTCGATAATAGATCATATCATATATGGATACGGACCATTTCATCAAGAAGCAACTCCACAAAATCACCGCTGCCCAGGACAAGATATCATTCTACAAATCCTGAAGGTTTGCCTCTCCTTCATTCTGCTAAACTGTGAATATGCCTTATCAGATGCACCCAAGTGGACGGGAAAAAGACTAAGAAGAATTGGTTGTCCGGATAAACCCATCAAACTTTCGTACTTTAAGACAAAAAACCAAGAGGCTCTTGGGCCATTGCAGGTTGAAGAAATGTGAGAAACGATGTCCGATCTGCACAGCAAAATCACAAGGAACATTGGCGAAACCAAAGGCTACAATAGCATACCAGTTCTTGGAAAGTGTAATACGTACATATTTAAAATCATCTAAACGGATGATGTATTAATGCAATACTATTATCATTCAAATTGTCACTAAAGCACCGACCGATAATTAAAGAACACATTATTAAATTAAAGAACAATTATTTACGAAATAAAGAGACCTTCATAAAAATAATTTATACCTTTATACCTAGAAACAAGGGCAACAGTAGTACAATTAATGAAGATAAGCGCTGCTGTACCCTGACGCTTATTTCCCGGCCTTGCAGCGAAAACATTAACAGGCTTCAAAACTTGTACATAAAGTATAGGAATTAATGGCTTAAGAACCCGATTTTCTGTTAATAAATCATTTATCAACTCTAGCAGTGTACAGCTTTGAATCCACCAGTAACACAAGGTGCGCATGCAATTTCCTTAGAATTTTACCAAACTCATCGATAACATTTATTGTAGTAACATAGGAATTTACGCCGCTCTGATGGCAATACACGATGGCATTTTTCAACTATAAAAAGAAAACACGAGCTGTCCTTCCATTGCCTGTCACGTGTTTTCAGCTATGATTTCTATTATTGCCGAGTAGACAAGGCACTCACAAGAGCTTCACCATCCCTCCCTAGCACTTCAATAACCGCGCATGACAACT

Protein

Uniprot

Uniprot term	Description
B3LF83	Probable inactive linolenate hydroperoxide lyase OS=Arabidopsis thaliana OX=3702 GN=CYP74B2 PE=2 SV=1
Q40778	Allene oxide synthase CYP74A2 OS=Parthenium argentatum OX=35935 GN=CYP74A2 PE=1 SV=2
K4CF70	Fatty acid hydroperoxide lyase, chloroplastic OS=Solanum lycopersicum OX=4081 GN=HPL PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00067	p450	Cytochrome P450	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036396	Homologous_superfamily	Cytochrome P450 superfamily	Interproscan
IPR002401	Family	Cytochrome P450, E-class, group I	Interproscan
IPR001128	Family	Cytochrome P450	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24286	CYTOCHROME P450 26	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004497	Molecular Function	monooxygenase activity	Interproscan
GO:0005506	Molecular Function	iron ion binding	Interproscan
GO:0016705	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	Interproscan
GO:0020037	Molecular Function	heme binding	Interproscan
GO:0016125	Biological Process	sterol metabolic process	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan