Gene detail

Detailed information of acyt_s0133.g37.t3 in Acropora cytherea

Genomic Location: sc0000133_pilon:577948...586417
NR annotation: XP_044176436.1, nuclear factor of activated T-cells, cytoplasmic 4-like isoform X4 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

acyt_s0133.g37.t3

ATTATCAACCCAGTTCGGTGATAGCGCGAGATCGAAACCGGTTAAACGAGTTCTCTGTGAAGTGAAGTTGTCCCTGTCCGTCGTCTATACCAGTTTCCAAAAGGTCTAGGTCCGTGTTTGGAACGAACGACTATGATTTGCGAAGCAACTTGGGCGCTGATGAAACAACTGGACGAGGCAGATGGCACGTCTCCTCGATCGCAGTTCATCTCACCTACGGGCCATGCGAACGTCAGTATTGAGAAAGAAGGCGTAGCGGAGGTTTGGCTTTGTGAGTGAAAATCTACGATATTCTCCCCTCCTATGCGTTTTTTCCCTCCTTATTCAACTGTGAATCACACAGGCTAGCTATTTAAGTCCTAAATTCACAACTAGATCCAACGTCCAGCGCTTGATATGGAATTCACGGAGACAAATCCCTTCGAAACAGATCATTTCGCCCCTGTGACCCAAGATAAAGAAATGAATATGTTTATCAACCCTTCGCCACCGGCTGAATTTGTGCCAACAATGGGAGAGGTAGCAGATTTTAGTATGGACATACCTTTCCCAGTTATAGATGTTCCATCACTTGGATTCCCCAACCTAGAAGAAGCATGTCAGTCTCGTTTTGATTCTGACGTATCGGACAGCTGTCCAGcatcaccttccccagcttcatctccatccccaCTCTGCAGCTCATCGTCTTCAGAGTCTGGTATTGAAGATGGTAGTGATATGGAAGAAGCAAGTACTTTTGTCGGAGCTCCCGCTGGTGGTATCATGTTAAAGAAGGAAAATCCATTATCCCCTTTAAATTCTTTGAATGAGGCCTTGGAGAGTGGAAATGGGAGGAAAAGGAATCGCCGTAGCAGCTGTAAGCAAACCTCTCATGTCAGCAGTGTCTTGGCAGAATTGAACAAACTACTTGTTCAAACTAGCATGTCTGCAACGTCAACTTCCATGGGCACATCTCTTCCATTGCAATCACACCCTGTTGTGACTGGCCTTGACCCATTGGCTTGTATTCAAACAACTGCAACCACTACGAAAGCCTCTCTCAGCTGCCCAATGTCCGTCCAGTCAACTGGTCAAGTGGATGCATTTGTTCAGAGTGTTCCCATTTCTTCTTCTAGTCAAATGGTTGGGTCAGTCACTTCTGCCAAGATGAGCATTTCGCCTCCAGTGGCTTCCCAGTCAAAAACGAGAAGCAAGCAAGCAAGGAATTCCAGGAAGCTAGATGAGCCTAAAATTGTTATCATAGAGGAACCAGAAGAGAATTATAGAGCAAGATATGAAAGTGAAGGCTGTCGAGGTCCCATCCATGGGTCCCAAGAGAATACTTTTCCAACTGTGAAGGTTACTGGATACAGTGATGCTATTTGGATCACGGTTCATTTGACCACCAGTGGTGGCATTCCACATTATCACTCAATCCACGGGCCGGGTTCAACCAAGGTTCCCTGCAAAGAGACCACTCTTGAAGGAGGAGTACCAGCTGTCCAAGTGATGGTTGGACCAGATTCAAACATGACTGCTGTGCTTGATTCCTTGAGCATTCGCAGGCTGCGAAATTGGGAAGGTGATAGGGAGTTGAGAAAGAGGGGAATTGATCCAAGAACGTGGAAGAAGGAACGCAAGGAAGCAAGATTGTTGTTCCAAGCAGAGATCCCAGAACAAGAAGGCCGCCCGGCAACAAAACTGTTATGCAAATCTAAGGTCTTCCAGTGCAGCTCATCTGGACCTCCTGGAAATCCAGAGATCTGGTGGGCTAGTATAAGTGAGGGTTCTGCTAATGGCGGTGATGAACTGGGTCTAATTGGAAAAAAGTTTCAATCTGGTTTTAAAGTTCGCTTCTTCTCAGTAAATGCCTCAGAGTTGACACTGTGTTGACCACAATGGACATTGCTCACATAATTGCTTTTTTGGAGGCTGTATATTTACAGGTGCTCGGTGTCCTCTATCTGTAAATTGTCTTTGAAGTAAAAGTTAATGATTCTT

Protein

Gene family

Gene family	Subfamily
Transcription Factors Family	RHD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00554	RHD_DNA_bind	Rel homology DNA-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR037059	Homologous_superfamily	Rel homology domain (RHD), DNA-binding domain superfamily	Interproscan
IPR011539	Domain	Rel homology domain, DNA-binding domain	Interproscan
IPR014756	Homologous_superfamily	Immunoglobulin E-set	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR008967	Homologous_superfamily	p53-like transcription factor, DNA-binding domain superfamily	Interproscan
IPR008366	Family	Nuclear factor of activated T cells (NFAT)	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12533	NFAT	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0003700	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0005667	Cellular Component	transcription regulator complex	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0008134	Molecular Function	transcription factor binding	Interproscan