Gene detail

Detailed information of acyt_s0153.g51.t2 in Acropora cytherea

Genomic Location: sc0000153_pilon:702180...709788
NR annotation: CAD7649243.1, unnamed protein product [Oppiella nova]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q3T127	Splicing factor U2AF 26 kDa subunit OS=Bos taurus OX=9913 GN=U2AF1L4 PE=2 SV=1
Q8BGJ9	Splicing factor U2AF 26 kDa subunit OS=Mus musculus OX=10090 GN=U2af1l4 PE=1 SV=1
Q7TP17	Splicing factor U2AF 26 kDa subunit OS=Rattus norvegicus OX=10116 GN=U2af1l4 PE=2 SV=1

Gene family	Subfamily
Transcription Factors Family	zf-CCCH

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00642	zf-CCCH	Zinc finger C-x8-C-x5-C-x3-H type (and similar)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000571	Domain	Zinc finger, CCCH-type	Interproscan
IPR009145	Family	U2 auxiliary factor small subunit	Interproscan
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12620	U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNIT	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0046872	Molecular Function	metal ion binding	Interproscan
GO:0000398	Biological Process	mRNA splicing, via spliceosome	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0089701	Cellular Component	U2AF complex	Interproscan
GO:0005681	Cellular Component	spliceosomal complex	Interproscan
GO:0030628	Molecular Function	pre-mRNA 3'-splice site binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K16197	YWHAB_Q_Z; 14-3-3 protein beta/theta/zeta	-	Exosome	ko04147	deepkoala