Gene detail

Detailed information of acyt_s0157.g53.t1 in Acropora cytherea

Genomic Location: sc0000157_pilon:591775...604964
NR annotation: XP_029202450.2, LOW QUALITY PROTEIN: stress-induced-phosphoprotein 1-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

acyt_s0157.g53.t1

TACCGCTTTCTTAGCTTGTGCAAGACCCAAGTAATAACTTGCTTCACAAATGACCGGATCTTTCTAGACGTGAGCCCTCGTTTCCTTACGCAGAGGATTAACACTAATTTTCAAATACGCATGATCAGCAGCACGTGCTGATGAAAAAAACTATACCAAGATGGCGGATGCCGTCAAGGCAGCTGAAGTGAAAAACAAGGGTAACTCGTTCCTTCAGACTGGAGATTTCGCGAAGGCCATCGAATGCTATACGGAGGCAATCGCCTTGAATCCGTTGGAACATGTCTTCTACAGCAATCGGTCGGCCGCTTATGCCAAGAATAAAAATTACGAAAAAGCACTAGCTGATGCCAGGAAATGCGTGGAGTTGAAGCCGGACTGGGGAAAGGGGTATTCAAGACTTGGAGCTGCGCTGTCATTTCTTGGACGCCATGCTGAAGCAGAAAGAGCTTACACCAAAGGTCTTCAGCTAGATCCCACCAATGAACAGCTGAAAAGTGGATTGGAAGAAGCAAAAGCTCAAGCAGCACGTAATAGCCCAATGACAAACCCATTTGCTGTGCCTAACCTTTACGTCCGCCTTGCTACAAACCCAAAGACTAAACAATTCTTAGAGCATCAGGACTACAGAGAAACAGTTGAAGCCCTCAGGAAGAATCCACAACTGCTTGGCACTCACCTTCAGGATCCAAGAATCATGCAAACAGTTGCAGTGTTGCTTGGTTTTGATGCTGACGTTCAAGACACTGAAGAAACCCCTTCACCGCCACGTCAAGAGGAGAAGCCAAAAGACGAACCAATGGAGACAGAACCAGAACCTGAACCCGAGGTGGATTTATCTATGAAACAGTCTCTGGAAGAGAAAGAGAAAGGAAATGTGGCATATAAAAAGAAGGATTTTGAGACAGCTTTACAACACTATGCAAAAGCTATTGAACTTGACCCCACCAATGCCAACTTCCTCACTAACAGAGCAGCGGTGTATTTTGAACAAGGCAAATATGATGAGTGCAGAGAAGAATGTGAGAAAGCAATCAATGTGGCCAGGGAACATGGTGGAGGCTTCAAATTGGTTGCTAAGGCTTATAGCAGAATTGGCAACGCCTACAACAAGCAAGGAAAGCTTGCAGAAGCCATTGATGCCTACAATAGATCTCTAGTGGAACACAGGACCCCAGACACACTGAAAAAAGTGCAGGAGGCAGAGAAGGCCCTCAAAGAGCAAGAAAGATTAGCATACATAAATCCAGAAAAGGCAGAGGAAGAAAGGGAAAAAGGCAACGTTCTTTTTAAGAAAGGTGATTTCCCAGAGGCACTCAAGTGTTACAAGGAGGCCATTAAGCGGGATCCAAACAATGCCAAACTTTACAGCAATCGTGCGGCCTGCTATCAAAAGCTCGCAGCATTTCAGTTAGCTCTGGCGGACTGTGATACCTGCATCGAATTGGATCCTTCATTTGTGAAAGGCTACACAAGAAAAGGTGGTGTCCTATATGCACTGAAGAAGTTCACCGATGCACAAAAAACATACCAGAAAGCTCTTGAGATTGACCCTAACAACAAGGAAGCCCAGGAAGGACTGCGAGCTTGTTATAAATCATTTTCCGAACAACCAACTGATCCAGAAGAGATTAGGAGACGAGCCAATGCCGATCCTGAAATACAGGAAATTCTGACTGATCCAGCCATGAAAATCATCCTCGAGCAGATGCAGGAGGATCCAAAAGCTGCTCAGGAGCATCTTAAAAATCCCGAAATCCGGAGCAGAATCCAAAAGCTGTACGAGGCTGGAATCCTGCAGATCCGCTGAGAAATTTTGCAAAATTCCAGGGAATTTGTAGGGAAACCTCAACGATTTGCTCATTGTTATACAATCTGCGCCAAGGTGCTTTGCTTTTTTCCTGTTCGAAGACTTCATGTCCTTTGGCTGAAAATTTCCGATCATGTCGGTGTTTAGGTGGTGTCGATTTACCCAGCAAAGTGGACTTAATCCAAGAACATCGACTCTTGAGATTTACAGTACGTTTTTCATTTTTCAACCGACAGTCTAGTCACCAAAACATACTGAAGCATTTATTCGTATCATTAATTACAAATCTTGCTTAATGAGGATTATTGTAAGGTCTCTCTTGGAATAAAAAGACGTAGTTGTT

Protein

Uniprot

Uniprot term	Description
Q4R8N7	Stress-induced-phosphoprotein 1 OS=Macaca fascicularis OX=9541 GN=STIP1 PE=2 SV=1
Q3ZBZ8	Stress-induced-phosphoprotein 1 OS=Bos taurus OX=9913 GN=STIP1 PE=2 SV=1
P31948	Stress-induced-phosphoprotein 1 OS=Homo sapiens OX=9606 GN=STIP1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00515	TPR_1	Tetratricopeptide repeat	Repeat	Interproscan
PF13181	TPR_8	Tetratricopeptide repeat	Repeat	Interproscan
PF13424	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan
PF17830	STI1-HOP_DP	STI1/HOP, DP domain	Domain	Interproscan
PF13414	TPR_11	TPR repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR006636	Domain	Heat shock chaperonin-binding	Interproscan
IPR041243	Domain	STI1/HOP, DP domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22904	TPR REPEAT CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0051879	Molecular Function	Hsp90 protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09553	STIP1; stress-induced-phosphoprotein 1	-	Chaperones and folding catalysts	ko03110	deepkoala