Detailed information of acyt_s0164.g16.t1 in Acropora cytherea

Genomic Location: sc0000164_pilon:261950...278795
NR annotation: XP_029183126.2, next to BRCA1 gene 1 protein-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
O08623Sequestosome-1 OS=Rattus norvegicus OX=10116 GN=Sqstm1 PE=1 SV=1
Q13501Sequestosome-1 OS=Homo sapiens OX=9606 GN=SQSTM1 PE=1 SV=1
Q5RBA5Sequestosome-1 OS=Pongo abelii OX=9601 GN=SQSTM1 PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyULD|UFD|PB1
Ubiquitin FamilyUBD|Alpha-Helix|UBA

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16158N_BRCA1_IGIg-like domain from next to BRCA1 geneDomainInterproscan
PF00564PB1PB1 domainDomainInterproscan
PF00569ZZZinc finger, ZZ typeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015940DomainUbiquitin-associated domainInterproscan
IPR000433DomainZinc finger, ZZ-typeInterproscan
IPR043145Homologous_superfamilyZinc finger, ZZ-type superfamilyInterproscan
IPR032350DomainNext to BRCA1, central domainInterproscan
IPR000270DomainPB1 domainInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR009060Homologous_superfamilyUBA-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR20930OVARIAN CARCINOMA ANTIGEN CA125-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K17987NBR1; next to BRCA1 gene 1 protein-Mitochondrial biogenesisko03029deepkoala

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