Gene detail

Detailed information of acyt_s0211.g4.t2 in Acropora cytherea

Genomic Location: sc0000211_pilon:64346...76800
NR annotation: XP_029213323.2, LOW QUALITY PROTEIN: lethal(3)malignant brain tumor-like protein 2 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

acyt_s0211.g4.t2

TTCCTACCAGCTCACAATATTACTGAAATAACAACTTGTCGGCCATCTTGGTTATTTTGCTGGAGACAAGCCTCGCTATGGAATGTGCCTTCAGGAAGTCTGGGAATGAATGACGTAGGGAAAAAACTCCGAAACCAACCACAAGCGCCATTTTGATCATCCGTGTGGCAATTAGTCGAGAATTGGACATGTGAATCGTAGAGATTCGTATAGGTTGTATAAATATTCATCTTGTAAGAAGATTCGTAACCAAGATATGCATTGAATTTGAACTTCTGTCATTTTATTGTACGTCATCACACAACCAAACCTTTGAAAAATCGTGGACTGGGTTTGATGAGTGACATGGAATCGAGGTTCGAATCCCCAACGATGGCGACAGCTGAGACGCAAAAAGATGAGGGTCAGGTGTCAACAGAAACAACTGAGGACAGTAACTTTCCCTCCGACAAAAATGCAAAGGCAGAGCAGAAGGCTGATTTGAAATCAACAGGAGAAAATCATGTGAGTGAGCTCCCTTTTGTTGCTCCATCCTCGGAAGAAGTGAACTTGCCAGCATCAATAAAGCAAGAACAAACAGAGACTACCATGAAGGTTGATACTGAAGCAGAAAGAGAGGGTGAAATTTTAGCTTTTTATGGTGAAGAGGAGGCACGCACCTGTGGAAGCCCCAATCCAGGCCCAGCAGTGGAAAAAGACAATACAGCAATGAAGCCAGCAGTCAAAACAGAAGAGAAGGTCAAACATGAGCCTTCCAAAGCTGAGATGCCAGAAGAGCCTCTTGCAGAAAACATGGCAAAATGTGAATTCTGCAGCTTCATTGGCATAAGGGAATCCTTTTTCTCAAAGTCCAAGCGCTTCTGTAAAATGGAATGCGCGAAGCGATACTCATCTGCGTCCAATATAAAACAGAAGTCCAAAGGAGACAAGATTGGGACTTCAAAAAAGAAACAACCGCACAGAACTTCAGACAGACACCATAAAGTTTCTTTAAAACTCGACCTTCTTTCTAACCTAGTGACTGTTTTGTCCGATACAGCAAAGTGCGAATTCTGCTGCTACATTGGAGTAAAGGAAAACTTTTTCTCGAAGTCCAAGCGCTTCTGTAAAATGGAATGCGCGAAACGATACTCTGCGTCGAATATTAAAAAGAAGTCGAAAGGGGAGAAGATCGGAACCCCAAAAAAGAAACACAGAACATCGGAAAGACATCAAAGTGCACACGCAGGAGCGTCTGCTCCGACCGGAACAACCTCTGCGTTAGCGTCTTCAGCAAACGCGACTTCCAGCGGGAATGCCTTAGATGCAGTGAAAGAGGATGATATGGAAGCTACCACCGCTGGAGCTTTTCCATTGTCGAGAGAAGATGTTGGCGAGAATTGGCAGAATCGCAGTTTTGATTGGACAGAATACTTGAAGAAAACAGCCGCTAAAGCAGCCCCGACACATTTATTTGAACACGTCAGCTTGAGTCCCTGTTTAAAGGGCGTCCACGTTGGTATGAAGGTCGAAGTGGTGAATTGCAGCATGGACGTGATCGATGACACCGATGTTGCATTCTGGGTAGCGGCAGTGATCGAGATCAAGCATTACAGAGTTCAGCTTCGCTATGAAGGCTACGAAGCTGATCCAGCGGGTGACTTCTGGTTTGATTTAAGATCGAAGAACATTCATCCAGTTGGCTGGTGTGCCAAGAGAAACAAGCTTCTTATACCACCTCCAGattattacaaaagtggagcgcctgtgaacttacatgatagccaagtgcacctccactataaaataaagcaattacatTTTATTTTATTGAATGGCCTGTTCTCTCGCGTTTCGTTACTGCAGCGATCAGAGAGAAGTGTGGAAATTGGAGAGATTATCTCTTCAAGTGTCTGTCGGGAGCCAAGACGTTCTCTGCTGAATTTCTACAACAGCTGCAAAGTCAGCCTTACAACAGATTCCAAAAACGAATGAAAGTTGAAGTGGCGGATCGCAAGAATATGTATTCGATGTGTGTGGCTACCATTGTTGATGTGATTGGAGATCGCCTCAGGATGCGCTACGATGGACTTGAAGATGACGTGGCTGAGGATTTCTGGTGTCACTATCAGT

Protein

Uniprot

Uniprot term	Description
Q969R5	Lethal(3)malignant brain tumor-like protein 2 OS=Homo sapiens OX=9606 GN=L3MBTL2 PE=1 SV=1
Q5R737	Lethal(3)malignant brain tumor-like protein 2 OS=Pongo abelii OX=9601 GN=L3MBTL2 PE=2 SV=1
Q1JQD9	Lethal(3)malignant brain tumor-like protein 2 OS=Bos taurus OX=9913 GN=L3MBTL2 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02820	MBT	mbt repeat	Domain	Interproscan
PF21319	zf-FCS_1	Zinc finger, FCS-type	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR038603	Homologous_superfamily	FCS-type zinc finger superfamily	Interproscan
IPR050548	Family	Polycomb group and chromatin remodeling factors	Interproscan
IPR012313	Domain	Zinc finger, FCS-type	Interproscan
IPR004092	Repeat	Mbt repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12247	POLYCOMB GROUP PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003682	Molecular Function	chromatin binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0035064	Molecular Function	methylated histone binding	Interproscan
GO:0042393	Molecular Function	histone binding	Interproscan
GO:0045892	Biological Process	negative regulation of DNA-templated transcription	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan