Gene detail

Detailed information of acyt_s0213.g4.t1 in Acropora cytherea

Genomic Location: sc0000213_pilon:87727...126155
NR annotation: XP_044164760.1, uncharacterized protein LOC114974955 isoform X1 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

acyt_s0213.g4.t1

TCTTCACCGGACCAGCCATTGTATCTGATAGCGCTTTTTCGTGGGGGAACTGAGAAGACAAAGAAGgatacttcgtccacattgtaccacgtgaacgagatggaataatcgcgaaagacttatgctagagcaaatttctattttgagGGACACAGACAAGACAAGTCATGGATGCTTGAATGGTGGCATTGAGATAAATTACATGAAGTTGGTTTTAACAATGTAATGATCATCAAAGGACTTGACAAGATGGTGATCATTAAAAGGATCTTTCAAAGGAATGGAAACATGATGAAGGTGGTGTAAAGGTGAAACTAGGACAACATGGAAGCTGGAAAGAAAAGGAAACGTTCCTTGCCTGTCCCTGAAGACCATTATGACATgcccccaaaatgcagggtcaagcgatcaaaacggagtgatcttccaaaatccagcaaaacctggagaaatgctgatctgccgattgatattttgctactaacagtggaggattgtgagttcttgagttgtttctcatttctggatcgacccttcaaaagttacaagaaagaagttggtatggtttattttggatacattggtaatactggtgaccaagagaagcttaaagttgcattaatgaaatgttccaaaggtgccgcagtcccagggggatcattaacagcagtaaagaatgctgtgagggtcttgagccctaaggtagtgatttcagtgggaacgtgcagtggtttaagctcagataaagtcaaactaggagatgtagttgtatctgccaagttgacaacagcagctggattcaaaactcctgtaagtagacatgtgagtgatcttgttagagatgcaccctatgggtgggttgctcctgtggaaaatccagatgaattggaggttgaagtacattgtgatggtgatattttgagccaaacacagacagcgaggtgtggaagtgctgatcttcatttacaatatccaggagcaattgctgttgagacagaaggggaagattttagtggAATGGGAGTTGTTCCAATAGACTGTCCCGCGGTGATGGATTTTGTGAGGGATGCTAATGTGATATCCCTGACAATAAATTTCAACGATGTCGGGCCATTGGGCTGTAAAGAGATGCAATattcactcaaagatgttaattgtaaactcactcagctgaacctatggagcaacacgataggagatcaaggagcagcacacctgagtgatgcactcaaagatgttaattgtaaactcactcagctggacgtagggggaaacaggataggagatcaaggagcagcacacctgagtgatgcactcacagatcttaattgtaaactcactcagctgaacctagggattaacaagataggagatcaaggagcagcacacctgagtgatgcactcaaagatgttaattgtaaactcactcagctggacctaaggggaaacatgactggagagcaaggagcagcacacctgagtgatgcactcaaagatgttaattgtaaactcactcagctggacgtagggggaaacgagataggagatcaaggagcagcacacctgagtgatgcactcaaagatgttaattgtaaactcactcagctatacgtagggggaaacggaataggagaccaaggagcagcacacctgaatgatgcactcaaagatgttaattgtaaactcactcagctggacctaggggataaccagataggagatcaaggagcagcacacctgagtgatgcactcaaagatgttaattgtaaactcactcagctggacgtagagggaaacggaataggagaccaaggagcagcacacctgagtgatgcactcaaaaatgttaattgtaaactcactcagctgaacctactgaataacgacatagaagatcaaggagcagcacacctgagtgatgcactcaaagatgttaattgtaaactcactcagctggacctaaggggaaacatgactggagagcaaggagcagcacacctgagtgatgcacgcaaagatgttaattgtcaactcactcaggtgaggctctgaggtaacatgataagaagacaaggagcaacacacctgagtgatgcactcaaagatgttaattgtaaactcactgagtccttagacttagactttgaa

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13516	LRR_6	Leucine Rich repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR035994	Homologous_superfamily	Nucleoside phosphorylase superfamily	Interproscan
IPR001611	Repeat	Leucine-rich repeat	Interproscan
IPR051261	Family	NOD-like receptor (NLR)	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24106	NACHT, LRR AND CARD DOMAINS-CONTAINING	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0009116	Biological Process	nucleoside metabolic process	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan