Detailed information of acyt_s0232.g3.t1 in Acropora cytherea

Genomic Location: sc0000232_pilon:70546...82372
NR annotation: XP_029206383.2, antiviral innate immune response receptor RIG-I-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O95786Antiviral innate immune response receptor RIG-I OS=Homo sapiens OX=9606 GN=RIGI PE=1 SV=2
Q9GLV6Antiviral innate immune response receptor RIG-I OS=Sus scrofa OX=9823 GN=RIGI PE=2 SV=1
Q6Q899Antiviral innate immune response receptor RIG-I OS=Mus musculus OX=10090 GN=Rigi PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16739CARD_2Caspase recruitment domainDomainInterproscan
PF11648RIG-I_C-RDC-terminal domain of RIG-IDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF18119RIG-I_CRIG-I receptor C-terminal domainDomainInterproscan
PF04851ResIIIType III restriction enzyme, res subunitFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR031964DomainCaspase recruitment domainInterproscan
IPR011029Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR021673DomainRIG-I-like receptor, C-terminal regulatory domainInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR038557Homologous_superfamilyRIG-I-like receptor, C-terminal domain superfamilyInterproscan
IPR041204DomainRIG-I-like receptor, C-terminalInterproscan
IPR006935DomainHelicase/UvrB, N-terminalInterproscan
IPR051363FamilyRIG-I-like Receptor (RLR) HelicaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14074HELICASE WITH DEATH DOMAIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016787Molecular Functionhydrolase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12646RIGI, DDX58; ATP-dependent RNA helicase DDX58EC:5.6.2.6
Pattern recognition receptorsko04054deepkoala

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