Detailed information of acyt_s0248.g24.t1 in Acropora cytherea

Genomic Location: sc0000248_pilon:339207...341475
NR annotation: XP_029179400.2, paired mesoderm homeobox protein 2-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
E7FDX5Transcription factor LBX1b OS=Danio rerio OX=7955 GN=lbx1b PE=2 SV=3
O75360Homeobox protein prophet of Pit-1 OS=Homo sapiens OX=9606 GN=PROP1 PE=1 SV=2
Q3LU41Homeobox protein prophet of Pit-1 OS=Theropithecus gelada OX=9565 GN=PROP1 PE=3 SV=1
Gene familySubfamily
Transcription Factors FamilyHomeobox

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001356DomainHomeobox domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR050394FamilyHomeobox NK-like transcription regulatorsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24340HOMEOBOX PROTEIN NKXInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0030154Biological Processcell differentiationInterproscan

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