Gene detail

Detailed information of acyt_s0280.g18.t1 in Acropora cytherea

Genomic Location: sc0000280_pilon:337816...347085
NR annotation: XP_015777844.1, PREDICTED: excitatory amino acid transporter 2-like [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

acyt_s0280.g18.t1

CTTCATGAATATGCTGAAGATGTTAATTCTTCCTTTGATCGTCGCCAGCTTGATCTGCGCCCTAGCAGCTTTGGATGCTAAAGCCACAGGCCGCGTTGGGAGGCGAGCTCTTGCTTACTATCTTTTTACCACTATCTTGGCCGTTATTCTGGGAATTGTCCTTGTAGTCAGTATCCGACCTGGAAGCTCCCCCCCAGAAGATGTGGATAAGGAAGTAAAACCTTACAGAACCTTGGACGCCTTTTTGGACCTAATAAGGAGCTGCTTTCCCAGCAACATTGTTGCAGCAACCTTTCGCCAGTACAAAACAAAATACACAACTGCCCCAGACAAAATAGTGTACAGGGACAAACCAGTCAACGGAACAACAGGCAACTATACTAAGGTGAAGGAGATCATAGATGGATCAAAGACTGTGCCAAATGGAAGGGAGGTGGATCCAAAAGGATCTATCAATGTCTTGGGGATTGTCGTGTTTTCGATTGTGTTTGGAATTGTTTTGGGACGGACTGGTGAGCGAGGAATGCCACTAAAAGCTTTCTTTGAGGCTCTCAATGAAGTGATTATGAAAATGGTTGCTCTGGTCATGTGGGTCTCGCCGATTGGCATTTGCAGTCTGATAGCAAACAAGGTGGCGTCTATGGATGACATAGTCAAGTCCTTGAACATGGTCGGGATGTACATGGCAACTGTAATAGTGGGCTTGTTTATTCATGCATTTGTCATCATTCCATTGCTGTACTTAATAGCAGCACGTAAAAATCCTCTGACATTTTATCTTGGCTTGAGGGATGCCATCATAACAGCTTTTGGAACATCATCAAGCTCTGCAACTCTTCCTACCACAATGCGCTGCCTTGAAGTGTATAATAAAGTAGATACTCGCATCAGCCGGTTTGTTCTGCCTCTGGGTGCCACCATCAATATGGATGGAACTGCCTTATATGAAGCAGTTGCTGCTGTTTTCATTGCGCAGGCCAATGGCATTACCTTGAATATTGGGCAGTTGATTACCACTTGCTTTACAGCCACTGCAGCGTCAATTGGTGCTGCTGGCATCCCACAGGCAGGCCTTGTAACCATGGTGCTTGTTCTACAGGCTGTGAATCTCCCCGTGAATGACATTGGACTTATCTTAGCAGTGGACTGGTTTTTGGATCGCATTCGTACTGCTGTGAATGTCATTGGTGACTCCTTTGGAGCTGGTATAGTGGAACACCTGTCACGCGATGATCTGCTGTCGATGGACTACACAGCAAGAGAGGACGCTGTGCCACTTGAAGCTCTGGAACGATACACACCCAGGCCGGAGGGCACTAATGATGTGCGAGCGAGTGAGGCATCGTTGAGGGCAACCAATTTCTAAGTAATGACTTCGCTGCCCATTCCCTCCATGATGGATTTGTTTTTTATCAATGAACAACAGCAGGACATTTAACCTAAAGAGACACTTTGTCTGGTTTCTTGTCCTTTTACCACTGCTTGAAACAACTTTGTGCAAAAAATGAGAAACTAAGTAGGTACAATAAAGATCAttatttcatattatttgtggctatcagtgtaataaagccatgacttaaaatgatactcatgaagtgatatgatattatttcactgcagtgaaatgatatcatatcacttcacggtttgaattgtccagttaaatagactgtaacacattatattttagctgacgcttggcatcaaattggcaggaagaattgctatgctgttttatcaacactttcttatacttcaactcggtggcttgattttttaaagcatgtactatgtaataaacaaattattacatgttatgagcctgatatcgtttttaatcacttgtttttaataccatatcgctcactcactcgaagactcgcttgatcgcgatatggtgttaaaaacgcatgaacaaaaacaatatcaggctcttacactgtagcatgtaataatctatagttaCTGTAAGTTTATCAATGTATACAAAAGGTGTTTACACAACATGTACATCTCTGTAATATTGTAGTTGAATTAGCCCAGGGATGAAAGGTTTTTCAGTTTTTACTTTCAGGTATGCCTTGCAATAGGCCCCGATAATGATAAATATATACTACCGGTATTCAAAGGCTAGATAACTTAGCGATAATTATTGCACTCAGGCACTTCCTATTGTAAAGTGTAAAATAAGGAAGATTACTTTTTAAGATATATTTGTACATTTAGCGTTTGCACAAACTGAATAAAAAATAAAAATAATA

Protein

Uniprot

Uniprot term	Description
O57321	Excitatory amino acid transporter 1 OS=Ambystoma tigrinum OX=8305 GN=SLC1A3 PE=1 SV=1
P46411	Excitatory amino acid transporter 1 OS=Bos taurus OX=9913 GN=SLC1A3 PE=2 SV=1
P43003	Excitatory amino acid transporter 1 OS=Homo sapiens OX=9606 GN=SLC1A3 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00375	SDF	Sodium:dicarboxylate symporter family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050746	Family	Dicarboxylate/Amino Acid:Cation Symporter	Interproscan
IPR036458	Homologous_superfamily	Sodium:dicarboxylate symporter superfamily	Interproscan
IPR001991	Family	Sodium:dicarboxylate symporter	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11958	SODIUM/DICARBOXYLATE SYMPORTER-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005313	Molecular Function	L-glutamate transmembrane transporter activity	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0015175	Molecular Function	neutral L-amino acid transmembrane transporter activity	Interproscan
GO:0015501	Molecular Function	glutamate:sodium symporter activity	Interproscan
GO:0015813	Biological Process	L-glutamate transmembrane transport	Interproscan
GO:0015293	Molecular Function	symporter activity	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan