Detailed information of acyt_s0301.g8.t2 in Acropora cytherea

Genomic Location: sc0000301_pilon:80356...108540
NR annotation: XP_029205559.2, probable ATP-dependent RNA helicase DDX52 isoform X1 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q99PT0Probable ATP-dependent RNA helicase DDX52 OS=Rattus norvegicus OX=10116 GN=Ddx52 PE=2 SV=1
Q8K301Probable ATP-dependent RNA helicase DDX52 OS=Mus musculus OX=10090 GN=Ddx52 PE=2 SV=2
A5D7C1Probable ATP-dependent RNA helicase DDX52 OS=Bos taurus OX=9913 GN=DDX52 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR050079FamilyDEAD box RNA helicaseInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR000629Conserved_siteATP-dependent RNA helicase DEAD-box, conserved siteInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR044764DomainDDX52/Rok1, DEAD-box helicase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47959ATP-DEPENDENT RNA HELICASE RHLE-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0003724Molecular FunctionRNA helicase activityInterproscan
GO:0030490Biological Processmaturation of SSU-rRNAInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14779DDX52, ROK1; ATP-dependent RNA helicase DDX52/ROK1EC:5.6.2.7
Ribosome biogenesisko03009deepkoala

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