Detailed information of acyt_s0319.g1.t1 in Acropora cytherea

Genomic Location: sc0000319_pilon:3866...62575
NR annotation: XP_015774910.1, PREDICTED: uncharacterized protein LOC107353103 [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
B2GV50DNA-binding protein RFX2 OS=Rattus norvegicus OX=10116 GN=Rfx2 PE=1 SV=1
P48379DNA-binding protein RFX2 OS=Mus musculus OX=10090 GN=Rfx2 PE=1 SV=2
Q4R3I8Transcription factor RFX3 OS=Macaca fascicularis OX=9541 GN=RFX3 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05729NACHTNACHT domainDomainInterproscan
PF18738HEPN_DZIP3DZIP3/ hRUL138-like HEPNDomainInterproscan
PF02257RFX_DNA_bindingRFX DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR011047Homologous_superfamilyQuinoprotein alcohol dehydrogenase-like superfamilyInterproscan
IPR039779FamilyRFX-like DNA-binding proteinInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR007111DomainNACHT nucleoside triphosphataseInterproscan
IPR041249DomainDZIP3-like HEPN domainInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR003150DomainDNA-binding RFX-type winged-helix domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12619RFX TRANSCRIPTION FACTOR FAMILYInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan

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