Gene detail

Detailed information of acyt_s0332.g1.t2 in Acropora cytherea

Genomic Location: sc0000332_pilon:1861...15795
NR annotation: XP_015755712.1, PREDICTED: uncharacterized protein LOC107335204 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

acyt_s0332.g1.t2

CAGAAACacgaacagttacaacagaggttacattctagaatttcaatggcagaggggagttctttctgagagcagagggaatgggagacattgaatattttgtctttgtccttgtcctacaggcaacaatggctgacttttacaaaacagcaggaatgccttgggtgattggtgctgtggatggctctttgattcacatcaaggcaccacatgatcaggaacatttgtttgtgtgccataaaagctttcatgccataaacaccatggcagtgtgcaatgcacaactttcattcaccaactatgtagataagaaaaagatAATGAATTTGCAAGACACGAGGCACGCTCTACAGTTACATTGGTACAAGAGCATTACGAAAAAGCTGGGCCACCGAGAAGCTCCCTTTACGCCTGGCAGCCTTCAGGAAGCCTTGGACAAGCACGACAAACAGttgaacattgccagggaaataggcgaccgggatggagaaaaaaaagcctatttcattcttggggtcgcttacgactcccacggcgatttcccaaaagctatcgaatgttatgaaaagagtttgaacttatacaggcaagcaGgcaaccgggatggagaagGaaatgcctatttcaatcttgggaacgctTacaAgtcccacggcgatttcccaaaagctatcgaatgttatgaaaagagtttgaacttatacaggcaagcaggcaaccgcgctggagaaggagatgcctattacaatcttggGAACGCTTACGACTCCCACGGCGATTTCCCAAAGGCTATCGAATGTTATGAAAAGAGTTCGAACTTATACAGGCAAGCAGGCAACCGGGATGGAGAAGGAGATGCCTATTACAATCTTGGGAtcgcttacaagtcccacggcgatttcCcaaaagctatcgaatgttAtgaaaagagtttgaacttatacagggaagcaggcaaccgggatagagaaggagatgcctatttCaatcttgggaacacttacaactcccacggcgatttcccaaaagctatcgaatgttatGaaaagagttcgaacttatacaggcaagcaggCaaccgggatggagaaggaaaagcctattacaatcttgggatcgcttacaattgcaagtcccacggcgatttcccaaaacttatcgaatATGTTGCAGACAGACTAGGCTTAAGGGGAAGTGAGATCCAATTCCTTGATGAGAGATATCCGAATCCCAGTGAAGCTACATTGGACTTTGTGGCTCATTTTTATGGCATGAATGTGGATGGGCTGTACGATGTGTTAACTGAGTGTGGGATGCCTGTGCTAGCTGATATTTTGTGACGTAAGGTCTGCGTAACAGTTCCTCTTGGAGCCAGGAGCTCTTTTAACCTTTGTTTTTGAGCAAGTCTCCCCAGTAATATGACTGCTGGGTTAGTTTTTCTATTCAATGTTGTCATCTTACAGCGGCGTATGAGTATAGGTGTATATGGCTTCTATTAAGCTTATCTTAATGTCAATATGTAACCTAGGAAAAGTTCTTGAACAATGAAACAAAGAATAGGAATTGAATGTACTGTTGATCAAACTACATTTTCCAATGAAAGTTTTTTTGAAGATTTTTCCCTTTTTGGTTTTCACTTAAAAGTTTTTTTATTCAATGTAAAAGCAGCGAAAATTTGGTTCTTCATCGCGAGTTTCTTATATTGAGCTTCTGAGTCAGTAAAGTACCCTCGGGCCAGAAAACATAAAGCTAACCTCTCTATTTCGTTCATTAATTTTACTTTTGTATAATCATGCAGACTTTTTAGGTCCTTAATTTGTGCAAATAGACcagctattcagaaaaagaccatcatttcacataaacttctcgagctttaaagggcagacctggaccgagctgttcgaagcatggtgagcacgaatcccgtgttaagagaaatgcaaatccagaggttgccatgatatttaaccctgtttagcgctacccctgcctcgaacaactcggctctgggctaagtttatcgattttgtaatcaacatcgttcccaagctttcttttctcgaggaggaggagtggaggaatccttagagcaagattgtactTGTGCTCGTAATCTCTTTTCATTTTTTTAAAAATTAAAATTACATTAAAATG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13424	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan
PF00515	TPR_1	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR024812	Family	Tetratricopeptide repeat protein 24	Interproscan
IPR006597	Repeat	Sel1-like repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47050	TETRATRICOPEPTIDE REPEAT PROTEIN 24	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K07126	K07126; uncharacterized protein	-	Function unknown	-	deepkoala