Gene detail

Detailed information of acyt_s0558.g1.t1 in Acropora cytherea

Genomic Location: sc0000558_pilon:1...1935
NR annotation: XP_015749061.1, PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp4-like [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q3MHE2	U4/U6 small nuclear ribonucleoprotein Prp4 OS=Bos taurus OX=9913 GN=PRPF4 PE=2 SV=1
Q9DAW6	U4/U6 small nuclear ribonucleoprotein Prp4 OS=Mus musculus OX=10090 GN=Prpf4 PE=1 SV=1
Q5NVD0	U4/U6 small nuclear ribonucleoprotein Prp4 OS=Pongo abelii OX=9601 GN=PRPF4 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08799	PRP4	pre-mRNA processing factor 4 (PRP4) like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036285	Homologous_superfamily	PRP4-like superfamily	Interproscan
IPR014906	Domain	Pre-mRNA processing factor 4 (PRP4)-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19846	WD40 REPEAT PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000398	Biological Process	mRNA splicing, via spliceosome	Interproscan
GO:0017070	Molecular Function	U6 snRNA binding	Interproscan
GO:0030621	Molecular Function	U4 snRNA binding	Interproscan
GO:0046540	Cellular Component	U4/U6 x U5 tri-snRNP complex	Interproscan