Gene detail

Detailed information of acyt_s0596.g3.t1 in Acropora cytherea

Genomic Location: sc0000596_pilon:93736...108950
NR annotation: XP_044172264.1, uncharacterized protein K02A2.6-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

acyt_s0596.g3.t1

TTCGTGATCATCTGGCACCACTTTCGCTAGGACAATTTTGGGAAATGGATTCCGATCGACCCACTTTACGAAGGCATTTTCTACTGTTTATCTCTTCCTTGCCGCTGCGAACTTATAAGAAATAGAATGACGTAGAAATTCTTCAAAATGCCCTCTTTGTTTCAAACCTCTTGTCCGCCATGTTTGTTGTCAATTTGCGTGTCTTCGCACGTGATAGACTGGCGCCCACGATTGGGATTATCACGTGGTCTTTTGTTGACCAATAACACGAGTGCATCCAAGCAAGCGCGTCCTTTGCAAACTTAACAGATTCCAGCGTGGATATTGGACTTCTATCGATGAACGATATTTCGTCCTTTCATTAAAAGAATTTACGGCTGATTAATAAAGTATAACGATGTCTGGGCGAAACACAAGAACAAGGAACATACCACGTCTACGAGAAGagatttggtatcttgtaagatacgaagacgatgacaatttaagggtgcttgaaagagatgaaatacatcattatcttcccagatgatgaaaacgaagacatccagattggagatattgttagtgtcttatagttgccaaatgggtaatttcatgatgatatgaagtgactgtaattccatactattaagtgattcaaattgctcacttaaggtataaagatgcatgaagaatacccaatattggtgtggtcatctcatatacagttaacaaacctaattaaccTccccaaaaaaagagaagtaaatggatagagatccataaggttgccagcatgagtagagcttgtttagaagctaactatgataatcatgtgggttcctctatgtttgggtttgatatggaatgcagtaacccttatcaaggccatacaaataatatacaactatcccccgaaggggagTTCGAAGCTAGAAATTGTACATGGTGTCAGAAGTTGGGATATTTACGTGAAAACGACGTTGATCAACCACAAGAAATGGTGACACACACTATTGCACCGCCAGCTCCCTTCAATTTCAAGAATCCCGAAGAATGGCCAAAATGGATACGGCGCTTCGAGCGATATCGCATATCGACCGAACTCAACGAGAAGGACGAAGTCCTGCAGATCAACACTATGATTTACTGCATGGGCGATGAAGCAGACGATATCGTCATGAGTTTTACTTTCGCGGAGGGAGACGAGAAGAAATACGCCAAAGTAAAAGAGAAATTTGATCAACATTTCATAATCAAGAGAAACGTGATCTTCGAACGTGCAAGGTTCAACATGAGAAAACAAGAACCCAGTGAGCCAGTCGACCCGTTTATAACAGACCTGTACTGTTTGTCTGAGCACTGCGAATTTGGAGCCCTCAGAGAAGAATTGATCCGTGATCGTATCGTGGTAGGGCTGCAAGATGTAAAGCTGAGCGAAAAACTTCAAATGGATTCAAGTCTCACACTACAAACAGCCATTAACAAAGCGAGGCAGAACGAGTCGGTAAAAAAGCAGCAAGAAATTCTTCGAAGCGGCTCTACTGATCCACCGGCATCACCAGAAGTTGACGAAGTGAACGAGGCGAAAGGGAAGCGAGATGGACGGCCTCACTCTCCGAAGAAAAAAAAATGCATGCGTTGCGGCAGCACTTCGGAAAACCACTCGCGTCAAAAATGTCCCGCTAGAGATGCCACGTGCGTAAGATGCAACAAAAGAGGCCACTTCGCGAAAGTCTGTCTCTCGGCCCCGAAGAAAGTGAACGAGATCGCAGCTGAAAATGCAGAAGAGCAAAACGAAACCGACGGCGAAGATGATGGCTTTTTCCTCGGAGCGATTGGAAACAAAGAGGAGAAAATGAAACGCTGGAGTGAACAGATCGAAGTCAATGGCGTGACGATCAAGTTCAAATTAGATACGGGCGCTGACGTGACGGTTATCGGAGATTCGATTTACAAGAGGATAATTTATGATGATGCCTGTCATTTGAAGAAATTTTGCGTGAATTCTGTACGGAAGGAGGTGACAGCAGTGTCCAAGAGGCTGGGGAAGATGGATATGGTAGTGGAAAAGTTACGTACATTTCAGGAATCAGGTGGATCCATGGTGCAAAGCCGattgcaacccccacgatcgaaatgaactccatggaggagacacggagacatgcaagcag

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
--	--	--	--	--

InterPro

InterPro term	Type	Description	Source
IPR021109	Homologous_superfamily	Aspartic peptidase domain superfamily	Interproscan
IPR001878	Domain	Zinc finger, CCHC-type	Interproscan
IPR036875	Homologous_superfamily	Zinc finger, CCHC-type superfamily	Interproscan
IPR001995	Domain	Peptidase A2A, retrovirus, catalytic	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR33198	ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0004190	Molecular Function	aspartic-type endopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan