Detailed information of acyt_s1212.g4.t1 in Acropora cytherea

Genomic Location: sc0001212_pilon:25456...30525
NR annotation: XP_015779083.1, PREDICTED: E3 ubiquitin-protein ligase TRIM71-like isoform X1 [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q62318Transcription intermediary factor 1-beta OS=Mus musculus OX=10090 GN=Trim28 PE=1 SV=3
O08629Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2
Q13263Transcription intermediary factor 1-beta OS=Homo sapiens OX=9606 GN=TRIM28 PE=1 SV=5

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00630FilaminFilamin/ABP280 repeatDomainInterproscan
PF00643zf-B_boxB-box zinc fingerDomainInterproscan
PF17170DUF51286-bladed beta-propellerRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011042Homologous_superfamilySix-bladed beta-propeller, TolB-likeInterproscan
IPR000315DomainB-box-type zinc fingerInterproscan
IPR014756Homologous_superfamilyImmunoglobulin E-setInterproscan
IPR017868RepeatFilamin/ABP280 repeat-likeInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR001298RepeatFilamin/ABP280 repeatInterproscan
IPR047153FamilyTRIM45/56/19Interproscan
IPR001258RepeatNHL repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR25462BONUS, ISOFORM C-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

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