Detailed information of acyt_s3116.g1.t1 in Acropora cytherea

Genomic Location: sc0003116_pilon:1...2295
NR annotation: XP_015756951.1, PREDICTED: collagen alpha-1(III) chain-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O42350Collagen alpha-2(I) chain OS=Aquarana catesbeiana OX=8400 GN=COL1A2 PE=2 SV=1
Q17RW2Collagen alpha-1(XXIV) chain OS=Homo sapiens OX=9606 GN=COL24A1 PE=1 SV=2
P18856Collagen EMF1-alpha (Fragment) OS=Ephydatia muelleri OX=6052 GN=COLF1 PE=3 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01410COLFIFibrillar collagen C-terminal domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR000885DomainFibrillar collagen, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
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 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005201Molecular Functionextracellular matrix structural constituentInterproscan

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