Detailed information of aech_s0001.g283.t1 in Acropora echinata

Genomic Location: sc0000001_pilon:4014948...4038597
NR annotation: XP_029211713.1, striatin-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P58405Striatin-3 OS=Rattus norvegicus OX=10116 GN=Strn3 PE=1 SV=2
Q9ERG2Striatin-3 OS=Mus musculus OX=10090 GN=Strn3 PE=1 SV=1
A5D7H2Striatin-3 OS=Bos taurus OX=9913 GN=STRN3 PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08232StriatinStriatin familyFamilyInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR051488FamilyWD repeat-containing striatinInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR013258DomainStriatin, N-terminalInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR020472RepeatG-protein beta WD-40 repeatInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15653STRIATINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K17608STRN1_3_4; striatin 1/3/4-Protein phosphatases and associated proteinsko01009deepkoala

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