Gene detail

Detailed information of aech_s0001.g301.t1 in Acropora echinata

Genomic Location: sc0000001_pilon:4220042...4232270
NR annotation: XP_044163017.1, poly [ADP-ribose] polymerase 1-like isoform X1 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P26446	Poly [ADP-ribose] polymerase 1 OS=Gallus gallus OX=9031 GN=PARP1 PE=1 SV=2
Q5RHR0	Poly [ADP-ribose] polymerase 1 OS=Danio rerio OX=7955 GN=parp1 PE=2 SV=1
Q9R152	Poly [ADP-ribose] polymerase 1 OS=Cricetulus griseus OX=10029 GN=PARP1 PE=2 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00533	BRCT	BRCA1 C Terminus (BRCT) domain	Family	Interproscan
PF08063	PADR1_Zn_ribbon	PADR1 domain, zinc ribbon fold	Domain	Interproscan
PF21728	PADR1_N	PADR1, N-terminal helical domain	Domain	Interproscan
PF00645	zf-PARP	Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR038650	Homologous_superfamily	PADR1, C-terminal domain superfamily	Interproscan
IPR003034	Domain	SAP domain	Interproscan
IPR001510	Domain	Zinc finger, PARP-type	Interproscan
IPR001357	Domain	BRCT domain	Interproscan
IPR012982	Domain	PARP1-like, PADR1 domain, zinc ribbon fold	Interproscan
IPR036957	Homologous_superfamily	Zinc finger, PARP-type superfamily	Interproscan
IPR050800	Family	ADP-ribosyltransferase diphtheria toxin-like	Interproscan
IPR036420	Homologous_superfamily	BRCT domain superfamily	Interproscan
IPR049296	Domain	PARP1-like, PADR1 domain, N-terminal helical subdomain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10459	DNA LIGASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0003950	Molecular Function	NAD+-protein poly-ADP-ribosyltransferase activity	Interproscan
GO:0005730	Cellular Component	nucleolus	Interproscan
GO:0006302	Biological Process	double-strand break repair	Interproscan
GO:0070212	Biological Process	protein poly-ADP-ribosylation	Interproscan
GO:1990404	Molecular Function	NAD+-protein ADP-ribosyltransferase activity	Interproscan