Detailed information of aech_s0001.g562.t2 in Acropora echinata

Genomic Location: sc0000001_pilon:7772195...7808924
NR annotation: XP_015751332.1, PREDICTED: nidogen-2-like isoform X1 [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9YH85Alpha-tectorin OS=Gallus gallus OX=9031 GN=TECTA PE=1 SV=1
P27590Uromodulin OS=Rattus norvegicus OX=10116 GN=Umod PE=2 SV=1
A0A6I8RMG7Protein disulfide isomerase CRELD1 OS=Xenopus tropicalis OX=8364 GN=creld1 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06119NIDONidogen-likeFamilyInterproscan
PF12947EGF_3EGF domainDomainInterproscan
PF07474G2FG2F domainDomainInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006605DomainG2 nidogen/fibulin G2FInterproscan
IPR003886DomainNIDO domainInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR024731DomainEGF domainInterproscan
IPR009017Homologous_superfamilyGreen fluorescent proteinInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24039FIBRILLIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007160Biological Processcell-matrix adhesionInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan

TOP