Detailed information of aech_s0003.g149.t2 in Acropora echinata

Genomic Location: sc0000003_pilon:2202743...2227313
NR annotation: XP_029194771.2, ATP-dependent RNA helicase DDX54-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8K4L0ATP-dependent RNA helicase DDX54 OS=Mus musculus OX=10090 GN=Ddx54 PE=1 SV=1
Q8TDD1ATP-dependent RNA helicase DDX54 OS=Homo sapiens OX=9606 GN=DDX54 PE=1 SV=2
O49289Putative DEAD-box ATP-dependent RNA helicase 29 OS=Arabidopsis thaliana OX=3702 GN=RH29 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF08147DBP10CTDBP10CT (NUC160) domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR050079FamilyDEAD box RNA helicaseInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR000629Conserved_siteATP-dependent RNA helicase DEAD-box, conserved siteInterproscan
IPR012541DomainDBP10, C-terminalInterproscan
IPR033517DomainDDX54/DBP10 family, DEAD-box helicase domainInterproscan
IPR014014DomainRNA helicase, DEAD-box type, Q motifInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47959ATP-DEPENDENT RNA HELICASE RHLE-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003724Molecular FunctionRNA helicase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14808DDX54, DBP10; ATP-dependent RNA helicase DDX54/DBP10EC:5.6.2.7
Ribosome biogenesisko03009deepkoala

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