Detailed information of aech_s0003.g421.t1 in Acropora echinata

Genomic Location: sc0000003_pilon:6335282...6343394
NR annotation: XP_029198553.2, katanin p60 ATPase-containing subunit A-like 1 isoform X2 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5U3S1Katanin p60 ATPase-containing subunit A-like 1 OS=Danio rerio OX=7955 GN=katnal1 PE=2 SV=1
B3EX35Katanin p60 ATPase-containing subunit A-like 1 OS=Sorex araneus OX=42254 GN=KATNAL1 PE=3 SV=1
Q9BW62Katanin p60 ATPase-containing subunit A-like 1 OS=Homo sapiens OX=9606 GN=KATNAL1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17862AAA_lid_3AAA+ lid domainDomainInterproscan
PF00004AAAATPase family associated with various cellular activities (AAA)DomainInterproscan
PF21126KATNA1_MITKatanin p60 subunit A1, MIT domainDomainInterproscan
PF09336Vps4_CVps4 C terminal oligomerisation domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR048611DomainKatanin p60 ATPase-containing subunit A1, MIT domainInterproscan
IPR003960Conserved_siteATPase, AAA-type, conserved siteInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR028596FamilyKatanin p60 subunit A1Interproscan
IPR041569DomainAAA ATPase, AAA+ lid domainInterproscan
IPR050304FamilyMicrotubule-severing AAA ATPaseInterproscan
IPR003959DomainATPase, AAA-type, coreInterproscan
IPR015415DomainSpastin/Vps4, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23074AAA DOMAIN-CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0008017Molecular Functionmicrotubule bindingInterproscan
GO:0008568Molecular Functionmicrotubule severing ATPase activityInterproscan
GO:0051013Biological Processmicrotubule severingInterproscan
GO:0015630Cellular Componentmicrotubule cytoskeletonInterproscan
GO:0140603Molecular Functionobsolete ATP hydrolysis activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K07767KATNA1; katanin p60 ATPase-containing subunit A1EC:5.6.1.1
Cytoskeleton proteinsko04812deepkoala

TOP