Detailed information of aech_s0003.g442.t1 in Acropora echinata

Genomic Location: sc0000003_pilon:6588362...6613532
NR annotation: XP_044178432.1, uncharacterized protein LOC122947184 isoform X1 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5ZJV6Calcipressin-3 OS=Gallus gallus OX=9031 GN=RCAN3 PE=2 SV=2
Q9JKK0Calcipressin-3 OS=Mus musculus OX=10090 GN=Rcan3 PE=2 SV=1
Q9UKA8Calcipressin-3 OS=Homo sapiens OX=9606 GN=RCAN3 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00008EGFEGF-like domainDomainInterproscan
PF00028CadherinCadherin domainDomainInterproscan
PF04847CalcipressinCalcipressinFamilyInterproscan
PF12661hEGFHuman growth factor-like EGFDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002126DomainCadherin-likeInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR006931FamilyCalcipressinInterproscan
IPR013032Conserved_siteEGF-like, conserved siteInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR050174FamilyProtocadherin/Cadherin-related Cell AdhesionInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24028CADHERIN-87AInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0019722Biological Processcalcium-mediated signalingInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K16669FAT4; protocadherin Fat 4-Cell adhesion moleculesko04515deepkoala

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