Gene detail

Detailed information of aech_s0004.g222.t1 in Acropora echinata

Genomic Location: sc0000004_pilon:3219214...3234658
NR annotation: XP_029207138.1, dnaJ homolog subfamily A member 2-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aech_s0004.g222.t1

GAAAAGAGGGAAAATTACGCGAGCTTTTGTTTGCGTGATGTTGCGGCTAGGCCAGAAATTACCCTGAGGAAAGACTGAAGAGATTAGAGGTCTCCTATTTTGAGCTTTTACACAATTCAAGACTGAAACTGTCGGAAGTGGGCCAGCAGTATCTCTCTCAAGTTATCCAAAGAAGTAAGAATTGAACTTCAGCAAGCGAGTAAAACAACTTAGCGGATAGTTGTCTAAGGGTTAGTCATCAATACAGCTAGCAGCATTACTTTCTCAATTTATGAATTAGTTAATGTGACAAATATCTGCAAGATTTACATTACATATTCAATTCCGTAATTCTCACGCAAAACCGATATTTAAAGCATGTCGGCAAATTGTCAATTGTTGCGATGGCCTCGAGCTCTTTCCCTGCTGTCCCGTAGGGACATCAATTGCTATTTGCCATTTTGTCCTTGACTAACCTTGGTGGCTGAGTCACGTTTCTTTAACCACTGAGGATTGGAAAGGAGGTGTACGTGTCGCTTATCAAACTGGTCATACTTTCAAAAACTGAACCTCCACAGCTATTTTTGTCCACTGGTTTCGATTACAGCGATTCTTTGTTAGTCACTACTCTGCTACGCCCGAGTTGATCCGTTAGAAAAACAAAGCGCGACACCGGATGAAGACATTTTCCCGACCAGCGCTCCCCCGACCTGTGTTCCTTTGATCACCCTTTGCTGGAACTTTAATTGTCGCCTGGAGCTTACCTGGGTACGAGCACGTGTATTGTTACGTCATGGTAACCGGCGTGGTCACACAACAGTTACCATTTTTTGTCCAATATGGCGGACACGCGGCTTTACGAAATTCTCGGTGTTGGTCCAAATGCCAGCGACACAGAGATAAAAAAGTCTTACAGGAAGCTCGCCAAGGAGTTTCATCCTGACAAGAATCCTAACGCTGGCGACCGTTTTAAAGAAATTAGCTTCGCTTATGAGGTTCTTTCAAACCCTGAAAAACGTGAACTTTATGACAAATACGGAGAAAAAGGACTCCGTGAAGGAGCCGGAATGGGTGGTGGCGGCATGGAAGACATTTTGTCCCATATTTTCGGTGGTTTTGGCGGAGGAATGTTTAGTGGTGGTGGATTCAGACAGAGGAGAAGACGAGGAGAAGATCTCTTTCATCCTTTGAAAGTTACTTTAGAAGATCTTTACAACGGAAAAACAACAAAATTGCAGCTTAGTAAGAATATTATTTGCACAGCTTGTAAAGGGGTAGGGGGAAAAGCTGGATCAGTGCGTACCTGTACTGGATGTAAGGGGCGTGGTATCAAGGTCTCCATACGACAAATTGGTCCTGGGATGGTTCAACAGATGCAGTCATCTTGCAATGAATGTGGTGGCGAAGGTGAAGTTATTAATCCAAAAGATAGATGTAAAAAATGCCAAGGCAAAAAAGTGTGCAAAGAAAGTAAGATTTTGGAGGTGCATGTCGATAAGGGTATGAATGATGGCCAAAAACTCACGTTCAAAGGAGAGGGGGATCAAGAGCCTGGCGTGGAGCCTGGGGACGTTATCCTTGTCCTTCAACAAAAGGAACATGAGGTTTTTACACGGGAGGGAGATGATCTGTTCATGACAAAGAAACTTCACCTTGCAGAAGCACTATGTGGCTTTCATATGGTTGTCAAGCACCTTGATAAAAGAAATTTAATAATAAAATACCCTGCTGGTCAGGTTATAGAACCAGGTTGTGTAAGAGGAGTGGTAGGAGAAGGTATGCCATTTTACAGAAGACCTTTCGAAAGGGGAAACCTTTACATCAAATTCGAAATTGAATTCCCGCCCAGTAACTTCATCCCTGAGGATAAAATAGAGttATTGGAGTCATTACTTCCGACACGGCCGAAGCAAGTACAACCAGGAGAAGATGCTGAGGAAGTCGACCTCATGGATCTTGATCCCAGATATCACCAACAGAGAAGGGGGAATGGGTTTGAAGATGGTAGTGACGATGAGAACGGCCACGGGCCCCGTGTCCAGTGCGCGCACCAATAGGATTTGAGCTTGACTAACTATGACAAGCTACGACAATTTAGGCTGTGCCTCCTTGTTCGCGGACAAACAATTTTCGAGGGTCTCGAGGCAGATACTTTCCGCCTGGTTAGCAATGGAAGTTGCCTGAACACTCTACAGATTGACTTACAGCGGCACACTTCTTTTTTCCTTTTCATACAAGCATAATGTACAATAATGATAATTATTTGTATGTCAGATGGTTCTGTTGGGTACAGATCATTTGTAAACTCAATGGAAACAAGAGACAATTGTTATGTACAAATCTGCATGGCAAGTAATTTAATGCAGTTATCAAACCAGGTATAAACCTGTAACACGTGCGAATGTAGTTTACAAACATTAATGATTTAAACCATTTGAAACATATCCAAAATCACAAGATTTTTAGGCAGTTTCTAAGTTACATATAGCGGTCGCGAAAATTTATTTTCTTTGGTTTTGTCAATTGTGGCATTTTGGATCCGCTGCATAAGAAATTCAAACAGTACCTGATTGATGTGCATAGGTAGAGATGAGCTATACATTTGTCAGTTTTCTCTCTTGAATGATAGTATGTATCATTTTCTAAACTAAGTTAAAGCAATCATGAAAAGAAAAAAAATTGTCCTGGCTTGGGAACTTGTTAAATATGATGTCGAATTTAAGTTTAAATATTTCTGGCATGAAAATTTTTTTTTTCTTTTTAGCAAACAGAATTTTGGTACGTTCATGATTCTGCAGCAGTGTTTGATAAGCTGTTAGTTTTTGTTTGTCGGACAATGTGCGACCTCTGGAAGGTAGAAGTTCGCAATTACAAGGTCTCAAGCGCATCCTTGAGGATTGGAAATGTGTCCGTAATTTGTTAAAAAGGTGCGTTTTTATGAGTGTCGGAGACACTTTCACACAGACACAATATGAGGGCCGGAAGCCCGAGGTGAAGTGACAGTTGTTTGCTTCAGAGCTCCGGTGTGGCTGTTGTGATTTTAAAAATGAGAATCGGAATTTATTGCAATATGTGCTATAATTATTATGGTTTGAAAGGAAGTCGGTTTAGTCCCTGCCCTTTTACGTAGATGGGTCAATTAGATGTATTGTCTGTTATCGTTTGAAAAAAAAAAGACAATCTTACAATCACTTTGCATCAAAGAGAGAAACTGAAATGCTTAGGTGATTATCTTGATT

Protein

Uniprot

Uniprot term	Description
Q2HJ94	DnaJ homolog subfamily A member 2 OS=Bos taurus OX=9913 GN=DNAJA2 PE=2 SV=1
Q9QYJ0	DnaJ homolog subfamily A member 2 OS=Mus musculus OX=10090 GN=Dnaja2 PE=1 SV=1
O60884	DnaJ homolog subfamily A member 2 OS=Homo sapiens OX=9606 GN=DNAJA2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00684	DnaJ_CXXCXGXG	DnaJ central domain	Domain	Interproscan
PF01556	DnaJ_C	DnaJ C terminal domain	Domain	Interproscan
PF00226	DnaJ	DnaJ domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008971	Homologous_superfamily	HSP40/DnaJ peptide-binding	Interproscan
IPR001623	Domain	DnaJ domain	Interproscan
IPR036869	Homologous_superfamily	Chaperone J-domain superfamily	Interproscan
IPR001305	Domain	Heat shock protein DnaJ, cysteine-rich domain	Interproscan
IPR036410	Homologous_superfamily	Heat shock protein DnaJ, cysteine-rich domain superfamily	Interproscan
IPR002939	Domain	Chaperone DnaJ, C-terminal	Interproscan
IPR044713	Family	DnaJ homolog subfamily A member 1/2-like	Interproscan
IPR018253	Conserved_site	DnaJ domain, conserved site	Interproscan
IPR012724	Family	Chaperone DnaJ	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43888	DNAJ-LIKE-2, ISOFORM A-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006457	Biological Process	protein folding	Interproscan
GO:0051082	Molecular Function	unfolded protein binding	Interproscan
GO:0031072	Molecular Function	heat shock protein binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0030544	Molecular Function	Hsp70 protein binding	Interproscan
GO:0042026	Biological Process	protein refolding	Interproscan
GO:0051087	Molecular Function	protein-folding chaperone binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0009408	Biological Process	response to heat	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09503	DNAJA2; DnaJ homolog subfamily A member 2	-	Mitochondrial biogenesis	ko03029	deepkoala