Gene detail

Detailed information of aech_s0004.g256.t1 in Acropora echinata

Genomic Location: sc0000004_pilon:3684204...3689881
NR annotation: XP_029188105.2, geranylgeranyl transferase type-2 subunit alpha-like isoform X2 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
A5A779	Geranylgeranyl transferase type-2 subunit alpha OS=Sus scrofa OX=9823 GN=RABGGTA PE=2 SV=1
Q92696	Geranylgeranyl transferase type-2 subunit alpha OS=Homo sapiens OX=9606 GN=RABGGTA PE=1 SV=2
Q5EA80	Geranylgeranyl transferase type-2 subunit alpha OS=Bos taurus OX=9913 GN=RABGGTA PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01239	PPTA	Protein prenyltransferase alpha subunit repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002088	Repeat	Protein prenyltransferase, alpha subunit	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11129	PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNIT	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008318	Molecular Function	protein prenyltransferase activity	Interproscan
GO:0018342	Biological Process	protein prenylation	Interproscan
GO:0004663	Molecular Function	Rab geranylgeranyltransferase activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005968	Cellular Component	Rab-protein geranylgeranyltransferase complex	Interproscan
GO:0018344	Biological Process	protein geranylgeranylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14050	RABGGTA; geranylgeranyl transferase type-2 subunit alpha	EC:2.5.1.60	Membrane trafficking	ko04131	deepkoala