Genomic Location: sc0000004_pilon:5091540...5095127
NR annotation: XP_029184376.2, LOW QUALITY PROTEIN: ranBP-type and C3HC4-type zinc finger-containing protein 1-like [Acropora millepora]
| CDS | |||||
| aech_s0004.g369.t3 | |||||
| Transcript |
| aech_s0004.g369.t3 |
| Protein |
| aech_s0004.g369.t3 |
| Uniprot term | Description | ||||
|---|---|---|---|---|---|
| E6ZIJ1 | RanBP-type and C3HC4-type zinc finger-containing protein 1 OS=Dicentrarchus labrax OX=13489 GN=rbck1 PE=3 SV=1 | ||||
| A9JTG5 | RanBP-type and C3HC4-type zinc finger-containing protein 1 OS=Danio rerio OX=7955 GN=rbck1 PE=2 SV=1 | ||||
| Q62921 | RanBP-type and C3HC4-type zinc finger-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Rbck1 PE=1 SV=3 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | E3|E3 activity|RBR |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13639 | zf-RING_2 | Ring finger domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR044066 | Domain | TRIAD supradomain | Interproscan |
| IPR051628 | Family | Linear Ubiquitination-Associated E3 Ligases | Interproscan |
| IPR047558 | Domain | Heme-oxidized IRP2 ubiquitin ligase 1, BRcat domain | Interproscan |
| IPR047559 | Domain | Heme-oxidized IRP2 ubiquitin ligase 1, modified RING finger, HC subclass | Interproscan |
| IPR047557 | Domain | Heme-oxidized IRP2 ubiquitin ligase 1, Rcat domain | Interproscan |
| IPR001841 | Domain | Zinc finger, RING-type | Interproscan |
| IPR017907 | Conserved_site | Zinc finger, RING-type, conserved site | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR22770 | UBIQUITIN CONJUGATING ENZYME 7 INTERACTING PROTEIN-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000151 | Cellular Component | ubiquitin ligase complex | Interproscan |
| GO:0004842 | Molecular Function | ubiquitin-protein transferase activity | Interproscan |
| GO:0043130 | Molecular Function | ubiquitin binding | Interproscan |
| GO:0043161 | Biological Process | proteasome-mediated ubiquitin-dependent protein catabolic process | Interproscan |
| GO:0097039 | Biological Process | protein linear polyubiquitination | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K10630 | RBCK1, HOIL1; RanBP-type and C3HC4-type zinc finger-containing protein 1 | EC:2.3.2.31 | Ubiquitin system | ko04121 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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