Detailed information of aech_s0005.g46.t2 in Acropora echinata

Genomic Location: sc0000005_pilon:547816...560239
NR annotation: XP_029189759.2, RNA-binding protein 4B-like isoform X2 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8VE92RNA-binding protein 4B OS=Mus musculus OX=10090 GN=Rbm4b PE=1 SV=1
Q64LC9RNA-binding protein 4B OS=Rattus norvegicus OX=10116 GN=Rbm4b PE=2 SV=2
Q9BQ04RNA-binding protein 4B OS=Homo sapiens OX=9606 GN=RBM4B PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00098zf-CCHCZinc knuckleDomainInterproscan
PF00076RRM_1RNA recognition motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR051945FamilyRRM MRD1 RNA Processing and Ribosome BiogenesisInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48039RNA-BINDING MOTIF PROTEIN 14BInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13187RBM4; RNA-binding protein 4-Spliceosomeko03041deepkoala

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