Gene detail

Detailed information of aech_s0006.g207.t1 in Acropora echinata

Genomic Location: sc0000006_pilon:3899341...3910145
NR annotation: XP_029206989.2, UBX domain-containing protein 1-like isoform X1 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aech_s0006.g207.t1

GAATGCATTGGATGCCTTCAGGGCAATCTCCGGGACAGATGAGGCCAAAAATGCACTCTCGTTGATACAAGTTTATTTCAACAACATTGTTAAAGATCCTCAGAATCAAAAATTCAGGAGAATAAGGATAAGTAATCCAAAGTTTTATTCATCCATCTGGCAACTGGAGCAGGCTCGGACTTTCCTTTTGCTTTCAGGATTTGAACAGGAAGGGGAATTTCTTGTTCTTCCATCTTCAATAAAGTTGGATGGAACTAAACTGTTGCTTGATGAAGCATTTGGAGTTTCGTCTGCAAATGAAGCAAGGAAACATAATGTCAGTGGCTCTTTGCACACAAATGATAAAAGCACAGTGCTGAAACTTAACTCACAAAAAGTGGATAGCTTGTTTGATCAAGATATCAAAGCGGATCTAACTTTGTTGTCATACATGAAGGAAATGGGTTATAATGTCACTGCTGCTGAGAAAGCTCTGATTGCAACAAAAAATGAAGGAGTTCAGCCTGCAATTGATTGGATAAACCAGAATCCTTATGAAGAAATAGTAAAATTACAGCAGGTGGAAGTTGTGCCACAGGAGAATACAAAGGGTACCAGCAAGTTCCCTAATGACAGCAATACCTTTGACAGTGGAGCACATGTCCAGCCGGCACCAGTGTCAAGATACCAAAAGACAATTGCTGAGCGGCACAAGTTTCAGGAGAAAGTCAGACTGGAAGCAATTGAAGAAGCAAAGTTGGAAAAGCAGAGAAAAAAACTGCAAAGAGAATATCTGCTAAAAGATTTGAAGGATGAAAAAGATGAAAAGTTAGAAAAAGCCAAACACGCTAAGCTGGCAGCGGAAAGTTCATCAGAAACTTCAACCTGCGTTGCAGTTGATCAAAAGGTTCACGATGGTGAATCACTCCTGATTGATTTGAAGATACGGTTACCTGATGGCGAGGTCTTGTCTATTAGTCTTTCCAGTGACTCAACTATAGAAACACTCTACCAGGAAGTAAGAAGATTGTGGCCAGAGAATGGTGAACAACAAGTGTCCCGTGACTTCGTTCTCATGACGTCATTTCCGCAAAGAAGAATAACTGACATGGAAAATAGTCTAGCGTCAGCAGGTTTGGGGCGTCGTGCAGCGTTAGTTGTTCAAAGATTACATGAGCAAGGGAGGCTAACACAAGAAGGTGGAACAGAGTCTGACTCAAATAATGGAAAGGACTTACTCGGCGTCTCTTGAGCGACAGATCGCAGAAAACTTCAGGAATGGCTCAATAAATGAACCCGGCTCCAATGGATGATATGTATGTTGACTTCAAGGGCTTGGAAAACGAACAGTAACGTATATTCTTTGCCTGAGAGCTGTTGGGCCGACGAGTTGTTTGACTCTGGCTTCGAAGATCTAAGTTTCCCGTTATATTGAGCAGGACAAGGAACACATACCTAACAAGCTACAATGATAACCGATCGTTGAAAGGGCAAAGTTTTAAATGAAATCAGGAATCTGTTTCGAAACAGACTTGTATCTTTTTAACACCGTTATTTTACATTATTATCATTTGCCCTTCACTGAAAGAAGACCACAGTTCATGCAGGAACCATATTTTATTAAGCACAAGGAACAGGCTTCCACCGTGGCATAGTGTCATTTTGGTTTTAATTTTTTACGTAGTAAAACCTTTGTAATTTTGAACAATCGTTTGTTATCATTAACACGAAATGCCATATTATGGCATTGGCTTATATTTAGAGATTACCTCTTGCACATATTTCAGGCGAATGGGTCTTTCCAGTATTTCAAGTTTGGTATGTGCGTTTAATTTCATCGAAGAGTTCATTGTGGATCAATGATTTTAATGTAAATCACTTCCATGGCATCAATTAAACTATAAGCGTTTAAGTTTTCCTTGAAAATGGACCAAGAGAGGCAGTATATCAGGCCGTCTTAAATTTGTGTCTTGCCGCGAGTAGAGACGTTTTATATTGACTTAGTGATGGCTGCTCTTGTCCAGCTGTATTTAATCCTTGTTCATTTATATTTGATTTAAACTTAGTTTCTTTCTAATTTGAACTTCACGTCCATTCATTTAAAACA

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	ULD\|UFD\|UBX

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00789	UBX	UBX domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001012	Domain	UBX domain	Interproscan
IPR009060	Homologous_superfamily	UBA-like superfamily	Interproscan
IPR029071	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46340	UBX DOMAIN-CONTAINING PROTEIN 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0031397	Biological Process	negative regulation of protein ubiquitination	Interproscan
GO:0032435	Biological Process	negative regulation of proteasomal ubiquitin-dependent protein catabolic process	Interproscan
GO:0036435	Molecular Function	K48-linked polyubiquitin modification-dependent protein binding	Interproscan
GO:1903094	Biological Process	negative regulation of protein K48-linked deubiquitination	Interproscan