Detailed information of aech_s0010.g175.t1 in Acropora echinata

Genomic Location: sc0000010_pilon:2546457...2582184
NR annotation: XP_044168826.1, polycystin-1-like isoform X1 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7ZU90Chromodomain-helicase-DNA-binding protein 1-like OS=Danio rerio OX=7955 GN=chd1l PE=2 SV=1
Q3B7N1Chromodomain-helicase-DNA-binding protein 1-like OS=Bos taurus OX=9913 GN=CHD1L PE=2 SV=1
Q86WJ1Chromodomain-helicase-DNA-binding protein 1-like OS=Homo sapiens OX=9606 GN=CHD1L PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF01477PLATPLAT/LH2 domainDomainInterproscan
PF02010REJREJ domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR001024DomainPLAT/LH2 domainInterproscan
IPR042060DomainPolycystin-1 like, PLAT/LH2 domainInterproscan
IPR014010DomainREJ domainInterproscan
IPR002589DomainMacro domainInterproscan
IPR043472Homologous_superfamilyMacro domain-likeInterproscan
IPR031053FamilyChromodomain-helicase-DNA-binding protein 1-likeInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR002859DomainPKD/REJ-like domainInterproscan
IPR000203Conserved_siteGPS motifInterproscan
IPR049730DomainSNF2/RAD5-like, C-terminal helicase domainInterproscan
IPR000434FamilyPolycystic kidney disease type 1 proteinInterproscan
IPR036392Homologous_superfamilyPLAT/LH2 domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47157CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 1-LIKEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003678Molecular FunctionDNA helicase activityInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

TOP