Detailed information of aech_s0011.g243.t1 in Acropora echinata

Genomic Location: sc0000011_pilon:2468972...2592661
NR annotation: XP_044173667.1, uncharacterized protein LOC114960368 [Acropora millepora]
Species abbreviation AECHI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A6NMZ7Collagen alpha-6(VI) chain OS=Homo sapiens OX=9606 GN=COL6A6 PE=1 SV=2
Q8C6K9Collagen alpha-6(VI) chain OS=Mus musculus OX=10090 GN=Col6a6 PE=1 SV=2
A2AX52Collagen alpha-4(VI) chain OS=Mus musculus OX=10090 GN=Col6a4 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001078 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13385
all species →		Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF00092
all species →		VWAvon Willebrand factor type A domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036465
all species →		Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR013320
all species →		Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR002035
all species →		Domainvon Willebrand factor, type AInterproscan
IPR006558
all species →		DomainLamG-like jellyroll foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47635
all species →		CUB DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
No Gene Ontology signature was detected for aech_s0011.g243.t1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K05637LAMA1_2; laminin, alpha 1/2-Viral myocarditisko05416deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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