Detailed information of aech_s0011.g386.t1 in Acropora echinata

Genomic Location: sc0000011_pilon:4185957...4195707
NR annotation: XP_029194643.2, PHD finger protein 12-like isoform X1 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q5SPL2PHD finger protein 12 OS=Mus musculus OX=10090 GN=Phf12 PE=1 SV=1
Q96QT6PHD finger protein 12 OS=Homo sapiens OX=9606 GN=PHF12 PE=1 SV=2
Q09698Uncharacterized protein C2F7.07c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC2F7.07c PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16737PHF12_MRG_bdPHD finger protein 12 MRG binding domainDomainInterproscan
PF00628PHDPHD-fingerDomainInterproscan
PF00498FHAFHA domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR031966DomainPHD finger protein 12, MRG binding domainInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR008984Homologous_superfamilySMAD/FHA domain superfamilyInterproscan
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR038098Homologous_superfamilyPHD finger protein 12, MRG binding domain superfamilyInterproscan
IPR000253DomainForkhead-associated (FHA) domainInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46309PHD FINGER PROTEIN 12Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000122Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0003714Molecular Functiontranscription corepressor activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0070822Cellular ComponentSin3-type complexInterproscan
GO:0140110Molecular Functiontranscription regulator activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K26244PHF12, RCO1; transcriptional regulatory protein PHF12/RCO1-Chromosome and associated proteinsko03036deepkoala

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