Detailed information of aech_s0012.g48.t1 in Acropora echinata

Genomic Location: sc0000012_pilon:1624058...1672980
NR annotation: XP_029201883.2, LOW QUALITY PROTEIN: uncharacterized protein LOC114966259 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O08852Polycystin-1 OS=Mus musculus OX=10090 GN=Pkd1 PE=1 SV=2
P98161Polycystin-1 OS=Homo sapiens OX=9606 GN=PKD1 PE=1 SV=3
Q7TN88Polycystin-1-like protein 2 OS=Mus musculus OX=10090 GN=Pkd1l2 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01477PLATPLAT/LH2 domainDomainInterproscan
PF12947EGF_3EGF domainDomainInterproscan
PF20519Polycystin_domPolycystin domainDomainInterproscan
PF02010REJREJ domainFamilyInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF08016PKD_channelPolycystin cation channelFamilyInterproscan
PF01825GPSGPCR proteolysis site, GPS, motif MotifInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR001024DomainPLAT/LH2 domainInterproscan
IPR000203Conserved_siteGPS motifInterproscan
IPR024731DomainEGF domainInterproscan
IPR046791DomainPolycystin domainInterproscan
IPR002859DomainPKD/REJ-like domainInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR046338Homologous_superfamilyGAIN domain superfamilyInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR013122DomainPolycystin cation channel, PKD1/PKD2Interproscan
IPR014010DomainREJ domainInterproscan
IPR036392Homologous_superfamilyPLAT/LH2 domain superfamilyInterproscan
IPR051223FamilyPolycystinInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10877POLYCYSTIN FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005262Molecular Functioncalcium channel activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0050982Biological Processdetection of mechanical stimulusInterproscan

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