Gene detail

Detailed information of aech_s0012.g7.t1 in Acropora echinata

Genomic Location: sc0000012_pilon:312511...317705
NR annotation: XP_020601443.1, uncharacterized protein LOC110040545 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

aech_s0012.g7.t1

ATGGATTTTACACCACTGAATCCAGAATCCGATCTTCAGTGCCTCGAAGAAAATCTCTACCGATGTGCCATCGAGGAAATTGAAAGGCTTTGTAAAGAACTGTCTAACAAGTACGACGCAGCAGCCTGCTGGATCCAACAAAAGGAATGTATTGATAACCCAGAATTGTTGGAAAAGGATGTGCTTGGTCAAACACTCATTCCAGATGATATAACTTTGGCAGAAGGAAATCCGAGATGGCTTGCTTGTAAAACGACGGGAGATGGCGACTGTTTATTTAATTCCATGTCGCGTGTCCTAATTGGCAATGAATCTCTGTGCTGTATTCTTCGCTTGCTGACTGCTGTTGAACTCTACATCAACAGCGATTTCTACTGTAAGCATCCTGCCTTTCAAGAATACGTTAATGCTAGTGTAATAAATGGTTATGATGAAGATACATTATTCACAATGTGCTTAACTGCCCAAGGAATCGCCGCATGGAATGCAAAGGATCAAGATTCAGCTGTAAAAGAAGAGGCAAAGTCATGTTCCAAGCAAAAAGAATGGTGTGGTATATTCCACATAATGGCACTAGCTAGTGTTACTGGAAGGCCAGTATACTCGGTCGATTCAAACGCAGGATCTCGAATAAGAGAGTTTTTTCATAGAAAAATGCCACCTCGCAGTCTGGAACAGATCAACCAAGATGTTGTTTACATCATGTGGTCAAGATATGGTACTCTTGATTCAGCGCATGAAAGCTGGTACCAACCCAATCATTTTATTCCCATTGTCAAGATCCCTCGCCTTGCAGCTTCAGACACAAGAATTCCTGGAGATTATAAAAATTTTATCAAAACAAAACCTCCACTTAGCATTAAAAGGCAAAGCAAGAGGGGGAGTATCACCAACTTTTTTACGAAGAAAGCTAGTGAGGAGTCCCACCGAACAAACAATAGTTTACCGGCAAGTGTTTGGGCTAGACCGGAAAACTGTGTTGCAGACTGTAAAGGTGCAAAGACCACAAAATTAGATGACACGAGTACTCCTGGAAAAGCAGACCCTGTGAAACATGAGGCTGTGAGGACGGCTCCTACACGGAGGCTTACCTGTTCCACCGTTGAAAGGTGGAAGAGCCAGGACTTGGCTCAGTATGATGCTGAATCTTGGCTAATATATGATGAAGAGAAGACTATGAAAGGACAGTACTGTATTGCACTGAAATGCAATGCCTGTATAGAATTTGAGTCAATAATTAGGAATAGACCCAAGTTTTCAAAAGCATTTATTGATGGTTCAACCAACTTCAGACTTACAAATGTGGTAGACCATGCCAAATCAGATACACATAAAATAGCTTTTTCCCTTTATTACAAAAAGCAAGAGGTGCTTACACAGCTGTCAAGGGATGTACTCAAATCCAAGTTCTACAGCATCCTGTTCGACTCTACCACTGATAAAACAGTGAGTGAACAGGAAGCTGTATTTGTATTATATTTTGAACCTCACCCAAGAGAACCACAGTTAAGTGGTGATCATAAACCAATGGTTCATGTAAAGCTGGGATTCTTGTCCTTAGAGAACTTAACAAATTCTACTGCACAAGGTGTGGTGGAAGGAATAAAAACCTCTCTAAAGAACTTGGGACTTCCAAATGTGGGTGAAATTCCACCTATACCAGTTGGTCTCGGAGGGGATGGGTGTAGCACCAATAGGGGTGAAACGAACGATGTTCAAGCATTGTTCAAGAAAGAATACTCTTGGTGTTTGTTTGTATGGTGTGTAGCCCACAGGTTAGAGTTGGCCCTAAAGGATTCTCTAAGCAACACTTATTTTAAAAAGGTTGATGAAGTTCTACTGAGATTGTATTACTTGTACGAAAACAGTCCAAAGAAACTTAGAGGTCTTAAAGAACTTCACCTAGCATACAAAGATACATTTCAGAGGGCTCAGTCAAGCCAAAGAAAGCCTCAGGAACAAGATGGATTAGCCACAAACCCTGCAGCTTTGAAACTTTTGGTTGACAAGTTTGGGCTGTTCATTCAGCACTTGGAGACATTAAGCTCAGACAGGGCTGGAGAATGGCAGAACATCTTGCACCTGATTCGTGTATTCCTCTCACTACCGGTCTCAAATGCAGCCTTGGAGAGGATGTTTAGTAACTTAGGAAGGGTGAAAACAGCAAAGAGATCATCACTTTCTCAAGGTACGCTTGAGAATATCTTGAGAATCCAAGCTGGAGGGCCACCACTGGAGAGCTATGACCCCTCCACAGCAGTTAATGACTGGGACAGAAGAAAACGAAGACGAACCAACCAAAAGCCTAGGAAGGAGTACAAGGTGCGAAGATCAACAAGAACAATTGCATATGATGGCCTGAAACAAGACGTTCCTGAGGAGGATACATCAGAAGCTTCAGATGATAACTCAAATTGTAGCCTTTTCAGGAGTGATGATGAGGAAGACAATATTGAATAG

Transcript

aech_s0012.g7.t1

TCTGCTTCACTGACCAAACGTTTTCACTGCAATAAAAGTCTGAAAGTTCTCGCTCTATTAAAATGGATTTTACACCACTGAATCCAGAATCCGATCTTCAGTGCCTCGAAGAAAATCTCTACCGATGTGCCATCGAGGAAATTGAAAGGCTTTGTAAAGAACTGTCTAACAAGTACGACGCAGCAGCCTGCTGGATCCAACAAAAGGAATGTATTGATAACCCAGAATTGTTGGAAAAGGATGTGCTTGGTCAAACACTCATTCCAGATGATATAACTTTGGCAGAAGGAAATCCGAGATGGCTTGCTTGTAAAACGACGGGAGATGGCGACTGTTTATTTAATTCCATGTCGCGTGTCCTAATTGGCAATGAATCTCTGTGCTGTATTCTTCGCTTGCTGACTGCTGTTGAACTCTACATCAACAGCGATTTCTACTGTAAGCATCCTGCCTTTCAAGAATACGTTAATGCTAGTGTAATAAATGGTTATGATGAAGATACATTATTCACAATGTGCTTAACTGCCCAAGGAATCGCCGCATGGAATGCAAAGGATCAAGATTCAGCTGTAAAAGAAGAGGCAAAGTCATGTTCCAAGCAAAAAGAATGGTGTGGTATATTCCACATAATGGCACTAGCTAGTGTTACTGGAAGGCCAGTATACTCGGTCGATTCAAACGCAGGATCTCGAATAAGAGAGTTTTTTCATAGAAAAATGCCACCTCGCAGTCTGGAACAGATCAACCAAGATGTTGTTTACATCATGTGGTCAAGATATGGTACTCTTGATTCAGCGCATGAAAGCTGGTACCAACCCAATCATTTTATTCCCATTGTCAAGATCCCTCGCCTTGCAGCTTCAGACACAAGAATTCCTGGAGATTATAAAAATTTTATCAAAACAAAACCTCCACTTAGCATTAAAAGGCAAAGCAAGAGGGGGAGTATCACCAACTTTTTTACGAAGAAAGCTAGTGAGGAGTCCCACCGAACAAACAATAGTTTACCGGCAAGTGTTTGGGCTAGACCGGAAAACTGTGTTGCAGACTGTAAAGGTGCAAAGACCACAAAATTAGATGACACGAGTACTCCTGGAAAAGCAGACCCTGTGAAACATGAGGCTGTGAGGACGGCTCCTACACGGAGGCTTACCTGTTCCACCGTTGAAAGGTGGAAGAGCCAGGACTTGGCTCAGTATGATGCTGAATCTTGGCTAATATATGATGAAGAGAAGACTATGAAAGGACAGTACTGTATTGCACTGAAATGCAATGCCTGTATAGAATTTGAGTCAATAATTAGGAATAGACCCAAGTTTTCAAAAGCATTTATTGATGGTTCAACCAACTTCAGACTTACAAATGTGGTAGACCATGCCAAATCAGATACACATAAAATAGCTTTTTCCCTTTATTACAAAAAGCAAGAGGTGCTTACACAGCTGTCAAGGGATGTACTCAAATCCAAGTTCTACAGCATCCTGTTCGACTCTACCACTGATAAAACAGTGAGTGAACAGGAAGCTGTATTTGTATTATATTTTGAACCTCACCCAAGAGAACCACAGTTAAGTGGTGATCATAAACCAATGGTTCATGTAAAGCTGGGATTCTTGTCCTTAGAGAACTTAACAAATTCTACTGCACAAGGTGTGGTGGAAGGAATAAAAACCTCTCTAAAGAACTTGGGACTTCCAAATGTGGGTGAAATTCCACCTATACCAGTTGGTCTCGGAGGGGATGGGTGTAGCACCAATAGGGGTGAAACGAACGATGTTCAAGCATTGTTCAAGAAAGAATACTCTTGGTGTTTGTTTGTATGGTGTGTAGCCCACAGGTTAGAGTTGGCCCTAAAGGATTCTCTAAGCAACACTTATTTTAAAAAGGTTGATGAAGTTCTACTGAGATTGTATTACTTGTACGAAAACAGTCCAAAGAAACTTAGAGGTCTTAAAGAACTTCACCTAGCATACAAAGATACATTTCAGAGGGCTCAGTCAAGCCAAAGAAAGCCTCAGGAACAAGATGGATTAGCCACAAACCCTGCAGCTTTGAAACTTTTGGTTGACAAGTTTGGGCTGTTCATTCAGCACTTGGAGACATTAAGCTCAGACAGGGCTGGAGAATGGCAGAACATCTTGCACCTGATTCGTGTATTCCTCTCACTACCGGTCTCAAATGCAGCCTTGGAGAGGATGTTTAGTAACTTAGGAAGGGTGAAAACAGCAAAGAGATCATCACTTTCTCAAGGTACGCTTGAGAATATCTTGAGAATCCAAGCTGGAGGGCCACCACTGGAGAGCTATGACCCCTCCACAGCAGTTAATGACTGGGACAGAAGAAAACGAAGACGAACCAACCAAAAGCCTAGGAAGGAGTACAAGGTGCGAAGATCAACAAGAACAATTGCATATGATGGCCTGAAACAAGACGTTCCTGAGGAGGATACATCAGAAGCTTCAGATGATAACTCAAATTGTAGCCTTTTCAGGAGTGATGATGAGGAAGACAATATTGAATAGAATGAATCCAACAGAATCTC

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	DUB\|OTU\|OTU

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05699	Dimer_Tnp_hAT	hAT family C-terminal dimerisation region	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008906	Domain	HAT, C-terminal dimerisation domain	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR047273	Domain	Vertnin-like, ovarian tumor domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46880	RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0046983	Molecular Function	protein dimerization activity	Interproscan