Gene detail

Detailed information of aech_s0013.g90.t2 in Acropora echinata

Genomic Location: sc0000013_pilon:2066209...2128439
NR annotation: XP_044165140.1, uncharacterized protein LOC114973480 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aech_s0013.g90.t2

GCTCACTGTAACACATTTGCAGACATCATTGACGAGCGAGTGttgtggtagacggatgatcttctagtgtcctgttttgtgttttttcgcacttggagtattacatttacacctcaagggatcatgggctgacttaatttcttccacaaggatatcattaattctttgcaatcggagtagacgaccgtgggatcattcccgcctctccgaagttgggcacctcttatttcctacaagggaagAGGCACCTACAGTTCCAGCTCAAGCTGACTAGCAGCAGGTAATTCAGGTGAAGAAGAATCAAGTTCAATCCTAGAAACATTTTGCCACCAGGCCTGAGCAGACAACAATGCAGCAACATATTTTCGATGATGTGGTGACCTTATGCAGTGAAAATGAGAGACAAAGAGTACGTTTTTGATCCAGTTGAAAACCAACATTCCTTCCATGAATATGGAGacgaaccTgagcctgtggctgttgaaaaaagtaaggagctttcgatcttctccagaagacaaaaagCcaccagagctcagtttcaagctgaaaaaagctggtgatgttccaaaaagcacggaagagtggagtgttgatcatctGccacttgacattttgctgttgactagtgtggagagctttgatttcttgagctgtttcaccttcttggatcaacctttcaaactttacaaaaaggagattgatgttgtgtacgttggacgcatgggaaacagcagtgtccaagaaaagttAaaggttgcattgatgaattgctctaaaggagctgcagccccagggggctcgttgacagtggttctgaatgcaattagggtcttgcaacctaaggctgtattttcagtgggaacttgcatcagtttaggcttggagaaggccaaaatgggagatgtagtcatatcttcgaagctatcgacCgcagagggattcaaaactcctggtagcccacttcttggcaatcttgttcgagatgctccatatgggtgggatgctccgttaaaaaatccagatgaatgggaagttaatatacattgcgatggcgatatcctgagccagtcaatgagagaaaagtgtcgatacgatgatatttgtgagcaatatcctggagcagttgcaattgagacagaaggcgaaggtgtttatgccgcagcctatgatgcgaacattgaatgggtggtagtgaaaggtgtggccagttattttcatcaaagccattctgcaacttctgaatggttaTCttttgcgagcaccatggctgcttctgtggtggccaaaatgctaagtgatccaAcagttttccgggaatggccgcactataaccaagagaaccctgcagttctacatcaagctgtggcagctaataatttgggtaaccAaggaccaagtgcaatcccagaaacagtgcaacGacatcctctggatgctgtaGtgacctcatgcagcgaaaacagaaggcaaggtgtatgtcatggagcatctggatctttacgaaagtatggagagtcatatgtcaagttgttaatcagcacaagaaatctcgagaaagaaaaagaagaagctatgaaagaaatgttaacacaagaggtccacagctatttaaaatttaatgatcattccggagatgagcttcatcaagcaatcaCatccttcactgtccacttaattaacgtctacaaggtacgcttggtcactcttggtattgcttctgtcatCatctttctggactgtcctacactagaaagtcttgagcgtctatggagtgactgtctctctggtcatctccataaagtggctgagcgataccttgtcaccgacgaaatgaagaagaagctcgacctggagacaatttgcctgaatgcaactatagagcaagaaaactactggaactgcaagaaggctctcatggaacgtccaagtacatgttcagaaatagatgacggagacggaaatgatagagtctacaccagTaacaaaagaccattccagtcactgggtaactatcggaaaacccttgagtatcatgaaaaacgattgaaaattgcaaaagaagtcgatgatcgggctgaggaaggaaaagcctatgaaaatctcggtaatgcttatcagtgcctgagtgactatcaaaaagccattgaagGAGCTGCGCTGGAGCTGCTGGCTCTGACATCTGCACAGGAACAAGGCCTGTTGAGGATCTTGCCCATCCCCACTCCTCAGGAGAAACATCGTTCCCTTTCCATGCTTGTACCTGGAGAAAAGAAACGGTGACTGTGAAATCGGGCGGTGTCTGGTGTCGGCTGAAGCTTCTCTGGTGAATAAGCTTTATTTCAATATTTGGCAATTTACAGTAAACTACCTGGTTTTGAAAGAAACTCAGGTTATGCAGGACTGCCACAACCCTTGATTTTTGAAGCTTTCTTCTTTTTTCTGAAGGGGATCGCTTTTCGTCATTAAATATTGCATCATAAATATCTTCAAACATTCCGGGTGCGTGCTCCTCACAAAACCTTTCCATCTTTGAGGGGTCATAGAGACTTTGTCCCCCATCATTGTAGTATTTGGTGAGAGCCTTGTGAAACTGCTGGAATAGTGTGCTAAAAAGATATGTCTCCTTATGAAAAAGAATTTTAAAATAAGGCAAAATAATATTATTTCAAGTTTTGCTACTTTGATATTGTTAGTCAAATTAGTGCAATTATTGTCATTGGTACTGTAGAGTTTAAGGTGTGTGTTTTTGCAATTTATGTGATGGGAGGGTTGTTGTGGTATCATTGTTAGAATGATGCATATTTTTGCATAATGTGGCAGTGGCCTTGGGAACTCAGAGAGGTATTCCGTTTGTATGTAGTTGCAAGTCCAAACTGATAGGAATAATCTCTTATGAGATGC

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
--	--	--	--	--

InterPro

InterPro term	Type	Description	Source
IPR035994	Homologous_superfamily	Nucleoside phosphorylase superfamily	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46832	5'-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE NUCLEOSIDASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0008782	Molecular Function	adenosylhomocysteine nucleosidase activity	Interproscan
GO:0008930	Molecular Function	methylthioadenosine nucleosidase activity	Interproscan
GO:0019284	Biological Process	L-methionine salvage from S-adenosylmethionine	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0009116	Biological Process	nucleoside metabolic process	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan