Detailed information of aech_s0014.g68.t1 in Acropora echinata

Genomic Location: sc0000014_pilon:680373...696197
NR annotation: XP_029201633.2, LOW QUALITY PROTEIN: uncharacterized protein LOC114966064 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q0DXS3Probable RNA-dependent RNA polymerase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RDR1 PE=2 SV=2
Q9LQV2RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana OX=3702 GN=RDR1 PE=2 SV=1
Q8LHH9Probable RNA-dependent RNA polymerase SHL2 OS=Oryza sativa subsp. japonica OX=39947 GN=SHL2 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04851ResIIIType III restriction enzyme, res subunitFamilyInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF05183RdRPRNA dependent RNA polymeraseFamilyInterproscan
PF01909NTP_transf_2Nucleotidyltransferase domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR007855FamilyRNA-dependent RNA polymerase, eukaryotic-typeInterproscan
IPR006935DomainHelicase/UvrB, N-terminalInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR043519Homologous_superfamilyNucleotidyltransferase superfamilyInterproscan
IPR002934DomainPolymerase, nucleotidyl transferase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23079RNA-DEPENDENT RNA POLYMERASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003968Molecular FunctionRNA-dependent RNA polymerase activityInterproscan
GO:0030422Biological ProcesssiRNA processingInterproscan
GO:0031380Cellular Componentnuclear RNA-directed RNA polymerase complexInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016787Molecular Functionhydrolase activityInterproscan
GO:0016779Molecular Functionnucleotidyltransferase activityInterproscan

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