Detailed information of aech_s0016.g126.t1 in Acropora echinata

Genomic Location: sc0000016_pilon:2537681...2543135
NR annotation: XP_029186266.2, 3'-5' ssDNA/RNA exonuclease TatD-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
B2VG453'-5' ssDNA/RNA exonuclease TatD OS=Erwinia tasmaniensis (strain DSM 17950 / CFBP 7177 / CIP 109463 / NCPPB 4357 / Et1/99) OX=465817 GN=tatD PE=3 SV=1
D0Z9R03'-5' ssDNA/RNA exonuclease TatD OS=Edwardsiella piscicida OX=1263550 GN=tatD PE=3 SV=1
D0KC773'-5' ssDNA/RNA exonuclease TatD OS=Pectobacterium parmentieri (strain WPP163) OX=561231 GN=tatD PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01026TatD_DNaseTatD related DNaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000504DomainRNA recognition motif domainInterproscan
IPR032466Homologous_superfamilyMetal-dependent hydrolaseInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR001130Family3'-5' ssDNA/RNA exonuclease TatD-likeInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR050891FamilyTatD-type Metallo-dependent HydrolaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10060TATD FAMILY DEOXYRIBONUCLEASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0016788Molecular Functionhydrolase activity, acting on ester bondsInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0008310Molecular Functionsingle-stranded DNA 3'-5' DNA exonuclease activityInterproscan

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