Gene detail

Detailed information of aech_s0016.g172.t2 in Acropora echinata

Genomic Location: sc0000016_pilon:3266153...3289256
NR annotation: XP_029186797.2, GTPase-activating protein-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aech_s0016.g172.t2

TTTCCACTCCAGCTTGTATCAAACAATAGAAAACATCAAGTTGTTTGCCTTAACACAGTCCAAGCATCACAAAAATCATCAACATGACAACAAAATTTGTGAAAGCCATAACAGAATCATTGCTTAAAGTTCCATATGGCATCAGGTGGCTTTGCAGCGCTATCGTCACCTTAGTCAAGGAGAAGTACCCTGATGTTGGTGATGCAAGTATTAATTCTCTGATTGGAGGCTTTTTCTTGTTGAGATTTCTAAACCCAGCCATTGTTACACCCAAAGCTTATAAACTTGTTAGCAGTGTACCAAGCCAATGTGCACGGAAAAACCTAACCTTGATTGCTAAGCTCATACAGAGTATGGCCAACAAGCATGTGGTTGGCAGTCATTTTAAGGAGGAACACATGCAACCACTGCATCCATTTGCGATGCGACATGTAAATGAAATTCAGAATTTCCTCACAAAATTATTTAATTTTAACAAAATCACAGATTTTTATGAAACATTGGAGATTGAACAATATTTATCACTTTCAAAAGACATTAAAGTAACAATCACACCAAACGAGATGTACAGAATTCATGAGTTGATTCTCAAATACAAAGAAGAACTTGCTCTTACCGAAGATGACCCATTACACATAATTCTAGATGAGTTAGGCCCCCCTGGAAAACAGTTGAGTTACAGCATGAATGCCACAATCAGTCTGGCTCTAACAAACAGATGGGACCACAGCAAAGTACTCAGGAGTGATTCCATAGAAATGCTGACTTTCAGGACTCCACCAGTGCAACAGAGATGCACAAAGGAACAATTAAGGGCGCTGTTTATCAAACTTTTGTCTATGGACACCAGACTGATGGAAGAAAGTTCTCTTCTTGATGTTGTAACCAGGGCGCATTTTTTACCAGCTAATCGCCAGAGTGGCGGAGAGGAAAAAGATGGTCAAGACACCCAAGAACGACGCAAAAGACTGGAAGAGCAGAAGTCGAAAATCGCTGGCTACATCTATAAGAAGTACAAAGCTCACCCGGAATTAAAGGGCATGTTATCCAAGGAGCCAGTTTTCTTTCAAGAAATAAAACAGGAAGTCCAAGCCAAGATGCAGAGATACTACAAACTAGCGCCTAAAGTCAAGAGTCTTCAAAATGTGTTAGAGACCCTGAAGAAACAGAATAGTTACCTCAAGGATCAGTTAAGCGTTTACAAAGTATACTTAAATTCTGTAAGAACAAAAGCAGCAACCCTTTCGTCAAAGAAATGTATACAGGATGTTACTCATTCAGAACGGAGCGTGCCAGTGCCTATTGACTTCACTTATTCTCAGCTTGAAAGAGAGGGAGTTATCTCGCACGGGGACTGGAGCCAAAGACTGACTGAAAAAAGAAAACCGGATTTGACAATAACAATCGCTTGTCCACAACCCGGTGTTTACCAAATAAGTCTTCGAAATAGAGGCGACCCCAAAACAGATCACGAAGTTCACTTAAATCTAGAAGAGTTATTGGAACTACAACACCATCGAGAACCGAGAGTTGAACTGTTTCGATATCAGATCCTAGTCAAAAAGGGTCAGCGCGATGCGTCCGCTAGCAATCGCTGTATTCCTCTCGTTTCGTCTCCCGTGTAAGGTTTTTGGTATGTGAAACAACTGAAGGCGGTTGTTTGGGGATGCGCTAGAGGAAATCCCATAGACTCCGGTTCTTCGCTTAAGTGAAATCGTGTCACTTGACGTAAAGCGGTTTTTGTCATTTCTTCACAAGACGTTCGCTTCAACGTGAGTTTACCTGAACACGGTGCTAATAAACAAGTTTCTTTCTCTGGGATTTATTTAGTAACGTTTACTAATGCCTTGATGCAGTCAGTTGTTGTACATAAAAGAAACTAGATTATAAAGTGGAGTGTCTGGTTTCTAATTTTAGGGCCCCACTGCGGTCAAACCGCAGAATAGAGCGAGAATATTTGAGACTGTTTTTCTAAACGTGTTAAAGAATTGTGATCTGTCATCGAAGAAAATATTTTTTTGTTACTTAACCGAGCCAAAGATGATATTTTTGGTGAAAACATTGGCATTTCCATATGGTAATAACACATTGCTAGCCTGGGAAAATTTCCTATGACATTCAATAAAGATATTTGACCTTA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03836	RasGAP_C	RasGAP C-terminus	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000593	Domain	RasGAP protein, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14149	RAS GTPASE-ACTIVATING PROTEIN WITH IQ MOTIF	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005096	Molecular Function	GTPase activator activity	Interproscan
GO:0005938	Cellular Component	cell cortex	Interproscan
GO:0046580	Biological Process	negative regulation of Ras protein signal transduction	Interproscan