Detailed information of aech_s0022.g53.t1 in Acropora echinata

Genomic Location: sc0000022_pilon:750291...761351
NR annotation: XP_015770767.1, PREDICTED: ATP-dependent RNA helicase DDX19A-like isoform X1 [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q3ZBV2ATP-dependent RNA helicase DDX19A OS=Bos taurus OX=9913 GN=DDX19A PE=2 SV=1
Q61655ATP-dependent RNA helicase DDX19A OS=Mus musculus OX=10090 GN=Ddx19a PE=1 SV=2
Q9NUU7ATP-dependent RNA helicase DDX19A OS=Homo sapiens OX=9606 GN=DDX19A PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR014014DomainRNA helicase, DEAD-box type, Q motifInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47958ATP-DEPENDENT RNA HELICASE DBP3Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003724Molecular FunctionRNA helicase activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0010494Cellular Componentcytoplasmic stress granuleInterproscan
GO:0016973Biological Processpoly(A)+ mRNA export from nucleusInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K18655DDX19, DBP5; ATP-dependent RNA helicase DDX19/DBP5EC:5.6.2.7
Messenger RNA biogenesisko03019deepkoala

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